Job Description Q46803 Confidence 35.64% Date Thu Jan 5 12:34:30 GMT 2012 Rank 370 Aligned Residues 186 % Identity 12% Template c2eggA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from2 geobacillus kaustophilus Resolution 2.25 Å

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		61	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure												.	.																																														.
Query SS confidence												.	.																																														.
Query Sequence		G	L	G	I	S	V	F	R	D	N	.	.	S	T	R	T	R	F	S	Y	A	S	A	L	N	L	L	G	L	A	Q	Q	D	L	D	E	G	K	S	Q	I	A	H	G	E	T	V	R	E	T	A	N	M	I	S	F	C	.	A	D	A	I	G	I	R	D	D	M	Y	L	G	A	G	N	A	Y	M	R	E	V
Query Conservation												.	.																																														.
Alig confidence												.	.																													.	.	.	.														.															.	.	.	.	.
Template Conservation																																										.	.	.	.																													.	.	.	.	.
Template Sequence		E	K	V	Y	G	L	I	G	F	P	V	E	H	S	L	S	P	L	M	H	N	D	A	F	A	R	L	G	I	P	A	R	Y	H	L	F	S	V	E	P	.	.	.	.	G	Q	V	G	A	A	I	A	G	V	R	A	L	G	I	A	G	V	N	V	T	I	P	H	K	L	A	V	.	.	.	.	.	I	P	F
Template Known Secondary structure										S	S		T	T		S												T	T												T	.	.	.	.	T													T								T	T		T	T	T	T	.	.	.	.	.	G	G	G
Template Predicted Secondary structure																																										.	.	.	.																													.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90						.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	A	L	D	D	G	Y	K	Q	G	V	L	P	Q	R	P	A	L	V	N	L	Q	C	D	I	D	H	P	T	Q	S	M	A	D	L	A	W	L	R	E	H	F	G	S	L	E	N	L	K	G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	R
Query Conservation
Alig confidence																									.																						.	.														.	.	.	.	.	.	.	.
Template Conservation																									.																						.	.														.	.	.	.	.	.	.	.
Template Sequence		L	D	E	V	D	E	H	A	R	R	I	G	A	V	N	T	I	I	N	N	D	G	R	.	L	V	G	Y	N	T	D	G	L	G	Y	V	Q	A	L	E	E	E	M	N	I	.	.	T	L	D	G	K	R	I	L	V	I	G	A	G	.	.	.	.	.	.	.	.	G	G	A	R	G	I	Y	F	S	L	L	S
Template Known Secondary structure			S										T									T	T		.																			T	T		.	.			T	T									S	.	.	.	.	.	.	.	.												T
Template Predicted Secondary structure																									.																						.	.														.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150									.	.	.	.	.	.	.	.	.	160	.	.
		218	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		F	G	M	.	D	V	T	L	A	H	P	E	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	A	S	G	G	S	F	R	Q	V	T	S	M	E	E	A	F	K	D	A	D	I	V	Y	P	K	S
Query Conservation					.
Alig confidence					.						.	.	.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		T	A	A	E	R	I	D	M	A	.	.	.	.	.	N	R	T	V	E	K	A	E	R	L	V	R	E	G	D	E	R	R	S	A	Y	F	S	L	A	E	A	E	T	R	L	A	E	Y	D	I	I	I	N	T	T
Template Known Secondary structure		T	T		S						.	.	.	.	.		S	S											S		S	S	S												T	G	G	G		S						S
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.						.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions