Job Description Q46803 Confidence 34.88% Date Thu Jan 5 12:34:30 GMT 2012 Rank 373 Aligned Residues 108 % Identity 14% Template c1yrwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein arna; PDBTitle: crystal structure of e.coli arna transformylase domain Resolution 1.70 Å

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		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.
Predicted Secondary structure																																					.																																			.	.						.	.	.
Query SS confidence																																					.																																			.	.						.	.	.
Query Sequence		K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	G	M	D	V	T	.	L	A	H	P	E	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	A	S	G	G	S	F	R	Q	V	T	S	M	.	.	E	E	A	F	K	.	.	.
Query Conservation																																					.																																			.	.						.	.	.
Alig confidence											.	.	.	.	.	.	.	.																			.											.	.	.	.	.	.																			.	.						.	.	.
Template Conservation											.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Sequence		M	K	T	V	V	F	A	Y	H	.	.	.	.	.	.	.	.	D	M	G	C	L	G	I	E	A	L	L	A	A	G	Y	E	I	S	A	I	F	T	H	T	D	F	Y	G	S	.	.	.	.	.	.	V	A	R	L	A	A	E	R	G	I	P	V	Y	A	P	D	N	V	N	H	P	L	W	V	E	R	I	A
Template Known Secondary structure											.	.	.	.	.	.	.	.													T	T																.	.	.	.	.	.									T							S				S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.									10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.							.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
				263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330			.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																																																					.	.
Query SS confidence		.	.																																																																					.	.
Query Sequence		.	.	D	A	D	I	V	Y	P	K	S	W	A	P	Y	K	V	M	E	E	R	T	E	L	L	R	A	N	D	H	E	G	L	K	A	L	E	K	Q	C	L	A	Q	N	A	Q	H	K	D	W	H	C	T	E	E	M	M	E	L	T	R	D	G	E	A	L	Y	M	H	C	.	.	L	P	A	D	I	S	G	V
Query Conservation		.	.																																																																					.	.
Alig confidence		.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.								.	.				.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.													.	.	.	.	.
Template Sequence		Q	L	S	P	D	V	I	F	S	F	Y	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	H	L	I	Y	D	E	I	L	Q	L	A	P	A	.	G	A	F	N	L	H	G	S	L	L	P	K	.	.	.	.	.
Template Known Secondary structure						S						S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S								T	T		T	T	.							S	S	S	T	T	T	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.													.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.																																					.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110
		339	340	.	.	.																				.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	C	K	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	T	E	G	V	F	E	K	Y
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	Y	R	G	R	A	P	L	N	W	V	L	V	N	G	E	T	E	T	G	V	T	L	H	R	M	V	K	R	A	D	A	G	A
Template Known Secondary structure		.	T			S									T	T		S											S	S	T	T		S
Template Predicted Secondary structure		.
Template SS confidence
			111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions