Return to main results Retrieve Phyre Job Id

Job DescriptionQ46803
Confidence69.93%DateThu Jan 5 12:34:30 GMT 2012
Rank275Aligned Residues70
% Identity23%Templatec1wziA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:malate dehydrogenase; PDBTitle: structural basis for alteration of cofactor specificity of2 malate dehydrogenase from thermus flavus
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   190...... ...200.........210.........220 .........230.........240.........250.........
Predicted Secondary structure  .











.........











Query SS confidence 






.























. . . . . . . . .






































Query Sequence  KIAMTWA. YSPSYGKPLSVPQGIIGLMTRFGM. . . . . . . . . DVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEE
Query Conservation 


 
  .     
   


 

       
 ......... 
 
  
        
   
       
  
  
 
  
Alig confidence 






.
........














.........

















.



















Template Conservation 

 



 
........ 

   
  
    
      
   
   
       
 
 
.
            
      
Template Sequence  RVAVTGAAG. . . . . . . . QIGYSLLFRIAAGEMLGKDQPVILQLLGSERSFQALEGVVME. LEDCAFPLLAGLEATDDPKV
Template Known Secondary structure  SSTTS........TTTTT
TT



TTT.TTT
TTS
Template Predicted Secondary structure 



........












.







Template SS confidence 















































































   5....10... ......20.........30.........40.........50..... ....60.........70.....
 
   260........
Predicted Secondary structure 




Query SS confidence 








Query Sequence  AFKDADIVY
Query Conservation 

  




Alig confidence 








Template Conservation   
  




Template Sequence  AFKDADYAL
Template Known Secondary structure  TTT
S
Template Predicted Secondary structure 



Template SS confidence 








   76...80....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions