Return to main results Retrieve Phyre Job Id

Job DescriptionQ46803
Confidence95.47%DateThu Jan 5 12:34:30 GMT 2012
Rank87Aligned Residues91
% Identity19%Templatec1wwkA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:phosphoglycerate dehydrogenase; PDBTitle: crystal structure of phosphoglycerate dehydrogenase from pyrococcus2 horikoshii ot3
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   185....190.........200.........210.........220.........230.........240.........250.........260....
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  NLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDA
Query Conservation   
 
 


 
       
   


 

       
  
 
  
        
   
       
  
  
 
  


  
Alig confidence 












........





















...









..........













Template Conservation   
 
  




 
........ 

  

  
  

  
    
...          ..........      
 

   
Template Sequence  ELEGKTIGIIGFG. . . . . . . . RIGYQVAKIANALGMNILLYDP. . . YPNEERAKEV. . . . . . . . . . NGKFVDLETLLKES
Template Known Secondary structure 

TT


S........TT

S...S

T..........T



Template Predicted Secondary structure 








........



...



..........








Template SS confidence 















































































   136...140........ .150.........160.........170 .........180 .........190....
 
   265....270.........280.........290.........300.........310.........320........
Predicted Secondary structure 


























Query SS confidence 































































Query Sequence  DIVYPKSWAPYKVMEERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYM
Query Conservation 





 
 
                   

 
 
          



 


  
   


 
Alig confidence 













...............................












.




Template Conservation 


   



  
 ............................... 

    
  

 .

 

Template Sequence  DVVTIHVPLVESTY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HLINEERLKLMKK. TAILI
Template Known Secondary structure  S



STTTT...............................T
B
S
T.T
Template Predicted Secondary structure 








...............................






.
Template SS confidence 































































   195....200........ .210.........220. .....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions