Job Description Q46803 Confidence 80.69% Date Thu Jan 5 12:34:30 GMT 2012 Rank 218 Aligned Residues 127 % Identity 16% Template c1pzfD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:lactate dehydrogenase; PDBTitle: t.gondii ldh1 ternary complex with apad+ and oxalate Resolution 2.20 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																				.																												.
Query SS confidence																																				.																												.
Query Sequence		K	G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	G	M	.	D	V	T	L	A	H	P	E	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	A	S	.	G	G	S	F	R	Q	V	T	S	M	E	E	A	F	K	D	A
Query Conservation																																				.																												.
Alig confidence													.	.	.	.	.	.	.	.																.																												.
Template Conservation													.	.	.	.	.	.	.	.
Template Sequence		R	R	K	K	V	A	M	I	G	S	G	.	.	.	.	.	.	.	.	M	I	G	G	T	M	G	Y	L	C	A	L	R	E	L	A	D	V	V	L	Y	D	V	V	K	G	M	P	E	G	K	A	L	D	L	S	H	V	T	S	V	V	D	T	N	V	S	V	R	A	E	Y	S	Y	E	A	A	L	T	G	A
Template Known Secondary structure										S		S	.	.	.	.	.	.	.	.														T									S	S	S	S																T	T										S						T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.									30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	V	Y	P	K	S	W	A	P	Y	K	V	M	E	E	R	T	E	L	L	R	A	N	D	H	E	G	L	K	A	L	E	K	Q	C	L	A	Q	N	A	Q	H	K	D	W	H	C	T	E	E	M	M	E	L	T	R	D	G	E	A	L	Y	M	H	C	L	P	A	D
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.																								.	.														.
Template Conservation												.	.	.	.	.	.	.	.	.	.																								.	.														.
Template Sequence		D	C	V	I	V	T	A	G	L	T	.	.	.	.	.	.	.	.	.	.	K	V	P	G	K	P	D	S	E	W	S	R	N	D	L	L	P	F	N	S	K	I	I	.	.	R	E	I	G	Q	N	I	K	K	Y	C	P	K	.	T	F	I	I	V	V	T	N	P	L	D
Template Known Secondary structure		S							S		S	.	.	.	.	.	.	.	.	.	.	S		T	T			G	G	G			S	G	G	G									.	.												T	T	.	S							S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																								.	.														.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.											.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions