Job Description Q46803 Confidence 31.74% Date Thu Jan 5 12:34:30 GMT 2012 Rank 383 Aligned Residues 165 % Identity 10% Template c1p74B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe) from2 haemophilus influenzae Resolution 2.40 Å

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.
Predicted Secondary structure																																								.																																				.	.
Query SS confidence																																								.																																				.	.
Query Sequence		Y	A	S	A	L	N	L	L	G	L	A	Q	Q	D	L	D	E	G	K	S	Q	I	A	H	G	E	T	V	R	E	T	A	N	M	I	S	F	C	.	A	D	A	I	G	I	R	D	D	M	Y	L	G	A	G	N	A	Y	M	R	E	V	G	A	A	L	D	D	G	Y	K	Q	G	V	L	.	.	P	Q	R	P
Query Conservation																																								.																																				.	.
Alig confidence																							.	.	.	.														.												.	.	.	.	.	.	.	.																	.	.
Template Conservation																							.	.	.	.																										.	.	.	.	.	.	.	.
Template Sequence		Q	N	K	L	A	A	Q	T	H	Q	T	M	E	Y	I	A	K	L	G	D	L	.	.	.	.	D	A	F	E	Q	Q	L	L	A	F	F	E	E	G	A	K	G	C	N	I	T	S	P	F	K	.	.	.	.	.	.	.	.	E	R	A	Y	Q	L	A	D	E	Y	S	Q	R	A	K	L	A	E	A	C	N	T
Template Known Secondary structure									T	T												T	.	.	.	.	T	T											T	T								T	T			.	.	.	.	.	.	.	.					T	T		S										T			S
Template Predicted Secondary structure																							.	.	.	.																										.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.									.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		A	L	V	N	L	Q	C	D	.	I	D	H	P	T	Q	S	M	A	D	L	A	W	L	R	E	H	F	G	S	L	E	N	L	K	G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	G	M	D	V	T	L	A	H	P	E	G	Y	D	L	I
Query Conservation										.
Alig confidence										.																				.	.	.														.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																														.	.	.														.	.	.	.	.	.	.	.																								.	.	.	.
Template Sequence		L	K	K	L	D	D	G	K	L	Y	A	D	N	T	D	G	I	G	L	V	T	D	L	Q	R	L	N	W	.	.	.	L	R	P	N	Q	H	V	L	I	L	G	A	G	.	.	.	.	.	.	.	.	G	A	T	K	G	V	L	L	P	L	L	Q	A	Q	Q	N	I	V	L	A	N	R	T	.	.	.	.	F
Template Known Secondary structure						S	S	S																			T	T		.	.	.			T	T								S	S	.	.	.	.	.	.	.	.	T	T	T	T	T	T							T	T								S	S	.	.	.	.
Template Predicted Secondary structure																														.	.	.														.	.	.	.	.	.	.	.																								.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.									.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.					.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	V	V	E	V	A	K	N	N	A	K	A	S	G	G	S	F	R	Q	V	T	S	M	E	E	A	F	K	D	A	D	I	V	Y	P	K	S
Query Conservation
Alig confidence																	.	.
Template Conservation																	.	.
Template Sequence		S	K	T	K	E	L	A	E	R	F	Q	P	Y	G	N	.	.	I	Q	A	V	S	M	D	S	I	P	L	Q	T	Y	D	L	V	I	N	A	T
Template Known Secondary structure												G	G	G	S		.	.						G	G	G				S		B	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions