Job Description Q46803 Confidence 100.00% Date Thu Jan 5 12:34:30 GMT 2012 Rank 5 Aligned Residues 317 % Identity 26% Template c1ortD_ PDB info PDB header:transferase Chain: D: PDB Molecule:ornithine transcarbamoylase; PDBTitle: ornithine transcarbamoylase from pseudomonas aeruginosa Resolution 3.00 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	H	E	K	D	F	L	L	T	W	E	Q	T	P	D	E	L	K	Q	V	L	D	V	A	A	A	L	K	A	L	R	A	E	N	I	S	T	K	V	F	N	S	G	L	G	I	S	V	F	R	D	N	S	T	R	T	R	F	S	Y	A	S	A	L	N	L	L	G	L	A	Q	Q	D	L	D	E	G	K	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	M	H	N	R	N	L	L	S	L	M	H	H	S	T	R	E	L	R	Y	L	L	D	L	S	R	D	L	K	R	A	K	Y	T	G	T	E	Q	Q	H	L	K	R	K	N	I	A	L	I	F	E	K	T	S	T	R	T	R	C	A	F	E	V	A	A	Y	D	Q	G	A	N	V	T	Y	I	D	P	N	S	S
Template Known Secondary structure				T	T			B	S			S																								T					S		T	T								S	S																T	T								S	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	A	H	G	E	T	V	R	E	T	A	N	M	I	S	F	C	A	D	A	I	G	I	R	D	D	M	Y	L	G	A	G	N	A	Y	M	R	E	V	G	A	A	L	D	D	G	Y	K	Q	G	V	L	P	Q	R	P	A	L	V	N	L	Q	C	D	I	D	H	P	T	Q	S	M	A	D	L	A	W	L	R
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		Q	I	G	H	K	E	S	M	K	D	T	A	R	V	L	G	R	M	Y	D	A	I	G	Y	R	G	F	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	V	E	E	L	A	K	F	A	G	V	P	V	F	N	.	G	L	T	D	E	Y	H	P	T	Q	M	L	A	D	V	L	T	M	R
Template Known Secondary structure							T														S							S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S	S					.				S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		E	H	F	G	S	L	E	N	L	K	G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	.	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	G	M	D	V	T	L	A	H	P	E	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	A	S	G	G	S	F	R	Q	V	T	S
Query Conservation																													.
Alig confidence						.	.												.	.	.	.	.	.	.				.
Template Conservation						.	.												.	.	.	.	.	.	.
Template Sequence		E	H	S	D	.	.	K	P	L	H	D	I	S	Y	A	Y	L	.	.	.	.	.	.	.	G	D	A	R	N	N	M	G	N	S	L	L	L	I	G	A	K	L	G	M	D	V	R	I	A	A	P	K	A	L	W	P	H	D	E	F	V	A	Q	C	K	K	F	A	E	E	S	G	A	K	L	T	L	T	E	D
Template Known Secondary structure						.	.	S		G	G	G							.	.	.	.	.	.	.	S		S		S	T													T									G	G	G	S																T	T							S
Template Predicted Secondary structure						.	.												.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150			.	.	.	.	.	.	.	.	.	160	.								.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		M	E	E	A	F	K	D	A	D	I	V	Y	P	K	S	W	A	P	Y	K	V	M	E	E	R	T	E	L	L	R	A	N	D	H	E	G	L	K	A	L	E	K	Q	.	C	L	A	Q	N	A	Q	H	K	D	W	H	C	T	E	E	M	M	E	L	T	R	D	G	E	A	L	Y	M	H	C	L	P	A	D	I
Query Conservation																																													.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	K	E	A	V	K	G	V	D	F	V	H	T	D	V	W	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	G	E	P	V	E	A	W	G	E	R	I	K	E	L	L	P	Y	Q	V	N	M	E	I	M	K	A	T	G	N	P	R	A	K	F	M	H	C	L	P	A	F	H
Template Known Secondary structure						T	T	T		S								S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		S	S										G	G	G		B								S	S		T	T							S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.																				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		336	.	.	.	340														.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	V	S	C	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	G	E	V	T	E	G	V	F	E	K	Y	R	I	A	T	Y	K	E	A	S	W	K	P	Y	I	I	A	A	M	I	L	S	R	K	Y	A
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	S	E	T	K	V	G	K	Q	I	A	E	Q	Y	P	N	L	A	N	G	I	E	V	T	E	D	V	F	E	S	P	Y	N	I	A	F	E	Q	A	E	N	R	M	H	T	I	K	A	I	L	V	S	T	L	A	D
Template Known Secondary structure		S	S	S	S	S										T	T	S	S	S		S	S	B						T	S	S	S	B																					T	S
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions