Job Description Q46803 Confidence 65.05% Date Thu Jan 5 12:34:30 GMT 2012 Rank 284 Aligned Residues 122 % Identity 20% Template c1llcA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: structure determination of the allosteric l-lactate dehydrogenase from2 lactobacillus casei at 3.0 angstroms resolution Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.				250	.	.	.	.	.	.
Predicted Secondary structure																																									.	.																														.	.	.
Query SS confidence																																									.	.																														.	.	.
Query Sequence		S	L	E	N	L	K	G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	G	M	.	.	D	V	T	L	A	H	P	E	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	A	S	G	G	.	.	.	S	F	R	Q	V	T	S
Query Conservation																																									.	.																														.	.	.
Alig confidence																		.	.	.	.	.	.	.	.																.	.					.	.	.	.	.																					.	.	.
Template Conservation																		.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Sequence		S	I	T	D	K	D	H	Q	K	V	I	L	V	G	D	G	.	.	.	.	.	.	.	.	A	V	G	S	S	Y	A	F	A	M	V	L	Q	G	I	A	Q	E	I	G	I	.	.	.	.	.	V	D	I	F	K	D	K	T	K	G	D	A	I	D	L	S	N	A	L	P	F	T	S	P	K	K	I	Y	S	A
Template Known Secondary structure			S					S						S		T	T	.	.	.	.	.	.	.	.														T			S	S				.	.	.	.	.			S		S											T	T	S		T	T	S					B
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.																						.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.									30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	E	A	F	K	D	A	D	I	V	Y	P	K	S	W	A	P	Y	K	V	M	E	E	R	T	E	L	L	R	A	N	D	H	E	G	L	K	A	L	E	K	Q	C	L	A	Q	N	A	Q	H	K	D	W	H	C	T	E	E	M	M	E	L	T	R	D	G	E	A	L	Y	M	H	C	L	P	A	D
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Y	S	D	A	K	D	A	D	L	V	V	I	T	A	G	A	P	K	Q	P	G	E	T	R	L	D	L	V	N	K	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	L	K	S	I	V	D	P	I	V	D	S	G	F	N	L	I	F	L	V	A	A	N	P	V	D
Template Known Secondary structure		T	T	T	T	T	S	S		S					B	T				S	S		S	S	S		S	T					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	T	T	T	T						T	T			S					B		S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions