Job Description Q46803 Confidence 100.00% Date Thu Jan 5 12:34:30 GMT 2012 Rank 6 Aligned Residues 311 % Identity 26% Template c1fvoB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ornithine transcarbamylase; PDBTitle: crystal structure of human ornithine transcarbamylase complexed with2 carbamoyl phosphate Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		H	L	H	E	K	D	F	L	L	T	W	E	Q	T	P	D	E	L	K	Q	V	L	D	V	A	A	A	L	K	A	L	R	A	E	.	N	I	S	T	K	V	F	N	S	G	L	G	I	S	V	F	R	D	N	S	T	R	T	R	F	S	Y	A	S	A	L	N	L	L	G	L	A	Q	Q	D	L	D	E	G	K
Query Conservation																																				.
Alig confidence																																				.
Template Conservation
Template Sequence		Q	L	K	G	R	D	L	L	T	L	K	N	F	T	G	E	E	I	K	Y	M	L	W	L	S	A	D	L	K	F	R	I	K	Q	K	G	E	Y	L	P	L	L	Q	G	K	S	L	G	M	I	F	E	K	R	S	T	R	T	R	L	S	T	E	T	G	F	A	L	L	G	G	H	P	C	F	L	T	T	Q	D
Template Known Secondary structure				T	T			B	S		G	G	G	S																					T	S						T	T	T	T								S	S			S													T	T								S	T	T
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	I	A	H	G	E	T	V	R	E	T	A	N	M	I	S	F	C	A	D	A	I	G	I	R	D	D	M	Y	L	G	A	G	N	A	Y	M	R	E	V	G	A	A	L	D	D	G	Y	K	Q	G	V	L	P	Q	R	P	A	L	V	N	L	Q	C	D	I	D	H	P	T	Q	S	M	A	D	L	A	W	L
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		I	H	L	G	V	N	E	S	L	T	D	T	A	R	V	L	S	S	M	A	D	A	V	L	A	R	V	Y	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	L	D	T	L	A	K	E	A	S	I	P	I	I	N	G	L	S	D	.	L	Y	H	P	I	Q	I	L	A	D	Y	L	T	L
Template Known Secondary structure		S		T	T	T	S			S												S							S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	S					S			S	.	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	H	F	G	S	L	E	N	L	K	G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	G	M	D	V	T	L	A	H	P	E	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	A	S	G	G	S	F	R	Q	V	T	S
Query Conservation
Alig confidence							.	.	.											.	.	.	.	.	.	.
Template Conservation							.	.	.											.	.	.	.	.	.	.
Template Sequence		Q	E	H	Y	S	.	.	.	S	L	K	G	L	T	L	S	W	I	.	.	.	.	.	.	.	G	D	G	N	N	I	L	H	S	I	M	M	S	A	A	K	F	G	M	H	L	Q	A	A	T	P	K	G	Y	E	P	D	A	S	V	T	K	L	A	E	Q	Y	A	K	E	N	G	T	K	L	L	L	T	N	D
Template Known Secondary structure						S	.	.	.			T	T							.	.	.	.	.	.	.	S		S									T	T	G	G	G	G	T									T	T																		T	T							S
Template Predicted Secondary structure							.	.	.											.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.				.	.	.	.	.	190	.	.	.	.								.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	E	A	F	K	D	A	D	I	V	Y	P	K	S	W	A	P	Y	K	V	M	E	E	R	T	E	L	L	R	A	N	D	H	E	G	L	K	A	L	E	K	Q	C	L	A	Q	N	A	Q	H	K	D	W	H	C	T	E	E	M	M	E	L	T	R	D	G	E	A	L	Y	M	H	C	L	P	A	D	I	S
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.											.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.											.	.	.
Template Sequence		P	L	E	A	A	H	G	G	N	V	L	I	T	D	T	W	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	G	R	E	E	E	K	K	K	R	L	Q	A	F	Q	G	Y	Q	V	T	M	K	T	A	K	V	A	A	S	.	D	W	T	F	L	H	C	L	P	R	.	.	.
Template Known Secondary structure							T	T		S								S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S	T	T							T	T	T		S	B							T	S		T	.	T							S	S		.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.											.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.																				.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.		.	380	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		G	V	S	C	K	E	G	E	V	T	E	G	V	F	E	K	Y	R	I	A	T	Y	K	E	A	S	W	K	P	Y	I	I	A	A	M	I	L	S	R	K	Y	A	.	K	P	G
Query Conservation																																												.
Alig confidence		.	.	.	.																																							.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	K	P	E	E	V	D	D	E	V	F	Y	S	P	R	S	L	V	F	P	E	A	E	N	R	K	W	T	I	M	A	V	M	V	S	L	L	T	D	Y	S	P	Q
Template Known Secondary structure		.	.	.	.		T	T	T	B						S	S	T	T	B
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions