Return to main results Retrieve Phyre Job Id

Job DescriptionQ46803
Confidence70.81%DateThu Jan 5 12:34:30 GMT 2012
Rank270Aligned Residues71
% Identity20%Templatec1ez4B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:lactate dehydrogenase; PDBTitle: crystal structure of non-allosteric l-lactate dehydrogenase2 from lactobacillus pentosus at 2.3 angstrom resolution
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   187..190.........200.........210.........220 .........230.........240. ........250.........260.
Predicted Secondary structure 














..






...





Query SS confidence 

































. .




















. . .



















Query Sequence  KGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGM. . DVTLAHPEGYDLIPDVVEVAK. . . NNAKASGGSFRQVTSMEEAF
Query Conservation   
 


 
       
   


 

       
 .. 
 
  
        
   
 ...      
  
  
 
  


Alig confidence 










........














..



.....











...



















Template Conservation     

 




........ 

   
  
       

 
..... 
         
 

                  

Template Sequence  NHQKVVLVGDG. . . . . . . . AVGSSYAFAMAQQGIAEEFVI. . . . . VDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDC
Template Known Secondary structure  TB


S........T

S.....
SSGGGGGS




GGGG
Template Predicted Secondary structure 





........






.....










Template SS confidence 















































































   1920......... 30.........40.........50 .........60.........70.........80.....
 
   262.......270
Predicted Secondary structure 





Query SS confidence 








Query Sequence  KDADIVYPK
Query Conservation    






Alig confidence 








Template Conservation    





 
Template Sequence  KDADLVVIT
Template Known Secondary structure  TT
S
Template Predicted Secondary structure 



Template SS confidence 








   87..90.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions