Return to main results Retrieve Phyre Job Id

Job DescriptionQ46803
Confidence71.77%DateThu Jan 5 12:34:30 GMT 2012
Rank265Aligned Residues69
% Identity25%Templatec1dliA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:udp-glucose dehydrogenase; PDBTitle: the first structure of udp-glucose dehydrogenase (udpgdh) reveals the2 catalytic residues necessary for the two-fold oxidation
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210.........220.........230.........240. ........250......
Predicted Secondary structure 



















............




Query SS confidence 




















































. . . . . . . . . . . .














Query Sequence  KKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAK. . . . . . . . . . . . NNAKASGGSFRQVTS
Query Conservation   


 
       
   


 

       
  
 
  
        
   
 ............      
  
  
 
Alig confidence 








........











.





.....











............














Template Conservation 


 




........




 
  

 .
  
 
..... 
     

 
  
  
  
  
             
  
Template Sequence  MKIAVAGSG. . . . . . . . YVGLSLGVLLSL. QNEVTI. . . . . VDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLD
Template Known Secondary structure 


S........TT.TS.....
S
TT

SS

S


S
Template Predicted Secondary structure 


.........


.....

















Template SS confidence 















































































   1........ 10.........20. ...... ..30.........40.........50.........60......
 
   257..260.........270.
Predicted Secondary structure 







Query SS confidence 














Query Sequence  MEEAFKDADIVYPKS
Query Conservation    


  






 
Alig confidence 














Template Conservation         





 
Template Sequence  SKAAYKEAELVIIAT
Template Known Secondary structure 
S

Template Predicted Secondary structure 




Template SS confidence 














   67..70.........80.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions