Job Description Q46803 Confidence 97.44% Date Thu Jan 5 12:34:30 GMT 2012 Rank 55 Aligned Residues 259 % Identity 20% Template c1d4fD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:s-adenosylhomocysteine hydrolase; PDBTitle: crystal structure of recombinant rat-liver d244e mutant s-2 adenosylhomocysteine hydrolase Resolution 2.80 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		L	L	T	W	E	Q	T	P	D	E	L	K	Q	V	L	D	V	A	A	A	L	K	A	L	R	A	E	N	I	S	T	K	V	F	N	S	G	L	G	I	S	V	F	R	D	N	S	T	R	T	R	F	S	Y	A	S	A	L	N	L	L	G	L	A	Q	Q	D	L	D	E	G	K	S	Q	I	A	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																													.	.																																.	.	.	.
Template Conservation																																													.	.
Template Sequence		I	G	L	A	A	W	G	R	K	A	L	D	I	A	E	N	E	M	P	G	L	M	R	M	R	E	M	Y	S	A	S	K	P	L	K	G	A	R	I	A	G	C	L	.	.	H	M	T	V	E	T	A	V	L	I	E	T	L	V	A	L	G	A	E	V	R	W	S	S	C	N	I	F	S	T	Q	D	H	A	A
Template Known Secondary structure		G	G	G													T	T												S	S	S		T	T	T	T								.	.			S													T	T								S	S	T	T	T
Template Predicted Secondary structure																																													.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
															101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																			.	140	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	E	T	V	R	E	T	A	N	M	I	S	F	C	A	.	.	.	D	A	I	G	I	R	D	D	M	Y	L	G	A	G	N	A	Y	M	R	E	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	L	D	D	G	Y	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	I	A	K	A	G	I	P	V	F	A	W	K	G	E	T	D	E	E	Y	L	W	C	I	E	Q	T	L	H	F	K	D	G	P	L	N	M	I	L	D	D	G	G	D	L	T	N	L	I	H	T	K	H	P	Q	L	L	S	G	I	R	G	I	S	E	E	T	T	T	G	V	H	N	L	Y	K	M	M	A
Template Known Secondary structure							T	T							S	S												T	T	S			T	T									S	S	S									T		G	G	G	G	T	T								S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		Q	G	V	L	P	Q	R	P	A	L	V	N	L	Q	.	.	.	.	.	.	C	D	I	D	H	P	T	Q	S	M	A	D	L	A	W	L	R	E	H	F	G	S	L	E	N	L	K	G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	G	M
Query Conservation																.	.	.	.	.	.
Alig confidence							.									.	.	.	.	.	.										.													.	.														.	.	.	.	.	.	.	.
Template Conservation							.																								.													.	.														.	.	.	.	.	.	.	.
Template Sequence		N	G	I	L	K	.	V	P	A	I	N	V	N	D	S	V	T	K	S	K	F	D	N	L	Y	G	C	R	E	.	S	L	I	D	G	I	K	R	A	T	D	V	.	.	M	I	A	G	K	V	A	V	V	A	G	Y	G	.	.	.	.	.	.	.	.	D	V	G	K	G	C	A	Q	A	L	R	G	F	G	A
Template Known Secondary structure		T	T				.	S					S	T	T						T	T	T	T							.													.	.			T	T	S								S	.	.	.	.	.	.	.	.														T
Template Predicted Secondary structure							.																								.													.	.														.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.									.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	T	L	A	H	P	E	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	A	S	G	G	S	F	R	Q	V	T	S	M	E	E	A	F	K	D	A	D	I	V	Y	P	K	S	W	A	P	Y	K	V	M	E	E	R	T	E	L	L	R	A	N	D	H	E	G	L	K	A	L	E	K	Q	C
Query Conservation
Alig confidence						.	.	.	.	.															.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.															.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	I	I	.	.	.	.	.	T	E	I	E	P	I	N	A	L	Q	A	A	M	E	.	.	.	.	.	.	.	G	Y	E	V	T	T	M	D	E	A	C	K	E	G	N	I	F	V	T	T	T	G	C	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						.	.	.	.	.			S											T	.	.	.	.	.	.	.	T										T	T	T		S								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.															.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240						.	.	.	.	.	.	.	.	.	250	.	.	.	.								.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	N	A	Q	H	K	D	W	H	C	T	E	E	M	M	E	L	T	R	D	G	E	A	L	Y	M	H	C	L	P	A	D	I	S	G	V	S	C	K	E	G	E	V	T	E	G	V	F	E	K	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.														.										.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.														.										.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	D	I	I	L	G	R	H	F	E	Q	M	K	D	.	D	A	I	V	C	N	I	G	H	.	.	.	.	.	.	.	.	F	D	V	E	I	D	V	K	W	L	N	E	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.		S	B						T	T	S		T	.	T							S	S	.	.	.	.	.	.	.	.	S	S		S	B							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.														.										.	.	.	.	.	.	.	.
Template SS confidence
											279	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300									.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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