Job Description Q46803 Confidence 36.04% Date Thu Jan 5 12:34:30 GMT 2012 Rank 365 Aligned Residues 201 % Identity 18% Template c1bvuF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:protein (glutamate dehydrogenase); PDBTitle: glutamate dehydrogenase from thermococcus litoralis Resolution 2.50 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.								.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																														.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.
Query Sequence		E	Q	T	P	D	E	L	K	Q	V	L	D	V	A	A	A	L	K	A	L	R	A	E	N	I	S	T	K	V	F	N	S	G	L	G	I	S	V	F	R	D	N	S	T	.	.	.	.	.	.	.	R	T	R	F	S	Y	A	S	A	L	N	L	L	G	L	A	Q	Q	D	L	D	E	G	K	S	Q	I	A	H
Query Conservation																																														.	.	.	.	.	.	.
Alig confidence											.														.	.	.	.	.																	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation											.														.	.	.	.	.																																																	.	.	.	.
Template Sequence		E	E	T	L	S	T	V	K	A	.	L	A	A	W	M	T	W	K	T	A	V	M	D	.	.	.	.	.	L	P	Y	G	G	G	K	G	G	V	I	C	N	P	K	E	M	S	D	R	E	K	E	R	L	A	R	G	Y	V	R	A	I	Y	D	V	I	S	P	Y	T	D	I	P	A	P	D	V	.	.	.	.
Template Known Secondary structure		T									.													T	.	.	.	.	.		S										S		G	G	G																	S	G	G	G		B	T	T	T					B		T	.	.	.	.
Template Predicted Secondary structure											.														.	.	.	.	.																																																	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	T	V	R	E	T	A	N	M	I	S	F	C	A	D	A	I	G	I	R	D	D	M	Y	L	G	A	G	N	A	Y	M	R	E	V	G	A	A	L	D	D	G	Y	K	Q	G	V	L	P	Q	R	P	A	L	V	N	L	Q	C	D	I	D	H	P	T	Q	S	M	A	D	L	A	W	L	R	E	H	F	G
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		Y	T	N	P	Q	I	M	A	W	M	M	D	E	Y	E	T	I	S	R	R	K	D	P	S	F	G	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	K	P	P	S	V	G	G	I	.	V	A	R	M	D	A	T	A	R	G	A	S	Y	T	V	R	E	A	A	K
Template Known Secondary structure		T																		T	T	S	S		G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S			G	G	G	T			.	S	S	T	T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																						.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		182	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.									.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure					.																																	.											.	.	.	.	.	.	.	.
Query SS confidence					.																																	.											.	.	.	.	.	.	.	.
Query Sequence		S	L	E	.	N	L	K	G	K	K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	.	R	F	G	M	D	V	T	L	A	H	.	.	.	.	.	.	.	.	P	E	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	A	S	G	G	S	F
Query Conservation					.																																	.											.	.	.	.	.	.	.	.
Alig confidence					.														.	.	.	.	.	.	.	.												.											.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.
Template Sequence		A	L	G	M	D	L	K	G	K	T	I	A	I	Q	G	Y	G	.	.	.	.	.	.	.	.	N	A	G	Y	Y	M	A	K	I	M	S	E	E	Y	G	M	K	V	V	A	V	S	D	T	K	G	G	I	Y	N	P	D	G	L	N	A	D	E	V	L	A	W	K	K	K	T	G	S	V	K	D	F	P	G	A
Template Known Secondary structure			T	T				T	T									S	.	.	.	.	.	.	.	.													T	T										T	T						T	T															S	S	S	T	T		T	T	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220									.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	V	T	S	M	E	E	A	F	K	D	A	D	I	V	Y	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	N	I	T	N	E	E	L	L	E	L	E	V	D	V	L	A	P
Template Known Secondary structure											T	S			S
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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