Job Description Q46803 Confidence 70.95% Date Thu Jan 5 12:34:30 GMT 2012 Rank 269 Aligned Residues 114 % Identity 14% Template c1b8vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: malate dehydrogenase from aquaspirillum arcticum Resolution 2.10 Å

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		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220								.	.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.						.	.	.
Query SS confidence																																	.	.	.	.	.	.	.						.	.	.
Query Sequence		K	I	A	M	T	W	A	Y	S	P	S	Y	G	K	P	L	S	V	P	Q	G	I	I	G	L	M	T	R	F	G	M	.	.	.	.	.	.	.	D	V	T	L	A	.	.	.	H	P	E	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	A	S	G	G	S	F	R	Q	V	T	S	M	E	E
Query Conservation																																	.	.	.	.	.	.	.						.	.	.
Alig confidence							.	.	.	.	.	.	.																				.	.	.	.	.	.	.						.	.	.
Template Conservation							.	.	.	.	.	.	.
Template Sequence		R	V	A	V	T	.	.	.	.	.	.	.	G	A	A	G	Q	I	C	Y	S	L	L	F	R	I	A	N	G	D	M	L	G	K	D	Q	P	V	I	L	Q	L	L	E	I	P	N	E	K	A	Q	K	A	L	Q	G	V	M	M	E	I	D	D	C	A	F	P	L	L	A	G	M	T	A	H	A	D	P	M	T
Template Known Secondary structure							.	.	.	.	.	.	.	S	T	T	S												T	T	T	T	T		T	T											S																	T	T	T		T	T								S
Template Predicted Secondary structure							.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.								.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	K	D	A	D	I	V	Y	P	K	S	W	A	P	Y	K	V	M	E	E	R	T	E	L	L	R	A	N	D	H	E	G	L	K	A	L	E	K	Q	C	L	A	Q	N	A	Q	H	K	D	W	H	C	T	E	E	M	M	E	L	T	R	D	G	E	A	L	Y	M
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.										.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.										.
Template Sequence		A	F	K	D	A	D	V	A	L	L	V	G	A	R	P	R	G	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	E	R	K	D	L	L	E	A	N	A	Q	I	F	T	V	Q	G	.	.	K	A	I	D	A	V	A	S	R	.	N	I	K	V	L
Template Known Secondary structure			T	T	T		S												T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.							S		T	.	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.										.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.																.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.		.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions