Job Description P39381 Confidence 100.00% Date Thu Jan 5 12:00:13 GMT 2012 Rank 1 Aligned Residues 385 % Identity 12% Template d1pw4a_ SCOP info MFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter Resolution 3.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.			.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		M	P	S	S	T	H	P	V	.	.	E	R	F	S	F	S	T	A	L	F	G	M	L	V	L	T	L	G	M	G	L	G	R	F	L	Y	T	P	M	L	P	V	M	M	A	E	G	S	F	S	F	S	Q	L	S	W	I	A	S	G	N	Y	A	G	Y	L	A	G	S	L	L	F	S	F	G	A	F	H	Q	P
Query Conservation										.	.
Alig confidence										.	.																				.															.
Template Conservation																															.															.
Template Sequence		L	P	A	A	E	I	D	P	T	Y	R	R	L	R	W	Q	I	F	L	G	I	F	F	G	Y	A	A	Y	Y	.	L	V	R	K	N	F	A	L	A	M	P	Y	L	V	.	E	Q	G	F	S	R	G	D	L	G	F	A	L	S	G	I	S	I	A	Y	G	F	S	K	F	I	M	G	S	V	S	D	R	S	N
Template Known Secondary structure					S																										.				T	S								T	T	.	S	S	T	T		S	S																											S
Template Predicted Secondary structure																															.															.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																							.	.																																													.	.	.
Query SS confidence																							.	.																																													.	.	.
Query Sequence		S	R	L	R	P	F	L	L	A	S	A	L	A	S	G	L	L	I	L	A	M	.	.	A	W	L	P	P	F	I	L	V	L	L	I	R	V	L	A	G	V	A	S	A	G	M	L	I	F	G	S	T	L	I	M	Q	H	T	R	H	P	F	V	L	A	A	L	.	.	.	F	S	G	V	G	I	G	I	A	L
Query Conservation																							.	.																																													.	.	.
Alig confidence																							.	.																																													.	.	.
Template Conservation
Template Sequence		P	R	V	F	L	P	A	G	L	I	L	A	A	A	V	M	L	F	M	G	F	V	P	W	A	T	S	S	I	A	V	M	F	V	L	L	F	L	C	G	W	F	Q	G	M	G	W	P	P	C	G	R	T	M	V	H	W	W	S	Q	K	E	R	G	G	I	V	S	V	W	N	C	A	H	N	V	G	G	G	I
Template Known Secondary structure																												S	S	S	S																T										T	T		T	T	T																		T	S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	E	Y	V	L	A	G	L	H	F	D	L	S	S	Q	T	L	W	Q	G	A	G	A	L	S	G	M	M	L	I	A	L	T	L	L	M	P	S	K	K	H	A	I	T	P	M	P	L	A	K	T	E	Q	Q	I	M	S	W	W	L	L	A	I	L	Y	G	L	A	G	F	G	Y	I	I	V	A	T	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	P	L	L	F	L	L	G	M	A	W	F	N	D	W	H	A	A	L	Y	M	P	A	F	C	A	I	L	V	A	L	F	A	F	A	M	M	R	D	T	P	Q	S	C	G	L	P	P	I	E	E	Y	K	N	D	T	A	K	Q	I	F	M	Q	Y	V	L	P	N	K	L	L	W	Y	I	A	I	A	N	V	F
Template Known Secondary structure													T			S	T	T		T																					S	S	T	T	T				S		T	T	T						T							T	S	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		234	.	.	.															.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.
Query Sequence		P	L	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	A	G	S	P	L	L	T	A	H	L	W	T	L	V	G	L	S	I	V	P	G	C	F	G	W	L	W	A	A	K	R	W	G	A	L	P	C	L	T	A	N	L	L	V	Q	A	I	C	V	L	L	T	L	A	S	.	.	.	.	.
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.
Template Conservation
Template Sequence		V	Y	L	L	R	Y	G	I	L	D	W	S	P	T	Y	L	K	E	V	K	H	F	A	L	D	K	S	S	W	A	Y	F	L	Y	E	Y	A	G	I	P	G	T	L	L	C	G	W	M	S	D	K	V	F	R	G	N	R	G	A	T	G	V	F	F	M	T	L	V	T	I	A	T	I	V	Y	W	M	N	P	A
Template Known Secondary structure																	B	T	T	B	S																																T	S	T	T																				T	T	S			T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																																					.															.
Query SS confidence																																					.															.
Query Sequence		D	S	P	L	L	L	I	I	S	S	L	G	F	G	G	T	F	M	G	T	T	S	L	V	M	T	I	A	R	Q	L	S	V	P	G	.	N	L	N	L	L	G	F	V	T	L	I	Y	G	I	.	G	Q	I	L	G	P	A	L	T	S	M	L	S	N	G	T	S	A	L	A	S	A	T	L	C	G	A	A	A
Query Conservation																																					.															.
Alig confidence																																					.															.																		.
Template Conservation																																																																						.
Template Sequence		G	N	P	T	V	D	M	I	C	M	I	V	I	G	F	L	I	Y	G	P	V	M	L	I	G	L	H	A	L	E	L	A	P	K	K	A	A	G	T	A	A	G	F	T	G	L	F	G	Y	L	G	G	S	V	A	A	S	A	I	V	G	Y	T	V	D	F	F	G	.	W	D	G	G	F	M	V	M	I	G	G
Template Known Secondary structure		T																	T													T	S		T	T																															S	S		.	S
Template Predicted Secondary structure																																																																						.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	I	A	A	L	I	S	T	V	Q	L	F	K	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	L	A	V	I	L	L	I	V	V	M	I	G	E	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions