Job Description P39381 Confidence 0.92% Date Thu Jan 5 12:00:13 GMT 2012 Rank 94 Aligned Residues 202 % Identity 8% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

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		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	A	G	A	L	S	G	M	M	L	I	A	L	T	L	L	M	P	S	K	K	H	A	I	T	P	M	P	L	A	K	T	E	Q	Q	I	M	S	W	W	L	L	A	I	L	Y	G	L	A	G	F	G	Y	I	I	V	A	T	Y	L	P	L	M	A	K	D	A	G	S	P	L	L	T	A	H	L	W	T	L
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	H	A	F	G	A	Y	F	G	L	G	V	S	I	A	L	T	T	A	A	Q	R	A	Q	P	I	E	S	D	A	T	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	S	M	L	G	S	M	V	L	W	L	F	W	P	S	F	A	T	A	I	V	P	F	E	Q	M	P	Q	T	I	V	N
Template Known Secondary structure		T	T																						T	S										.	.	.	.	.	.	.	.	.	.	.	.	.																				T	T	S		G	G	G
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.														.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320						.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.
Query Sequence		V	G	L	S	I	V	P	G	C	F	G	W	L	W	A	A	K	R	W	G	A	L	P	C	L	T	A	N	L	L	V	Q	A	I	C	V	L	L	T	L	A	S	D	S	P	L	L	L	I	I	S	S	L	G	F	G	G	T	F	M	G	T	T	S	L	V	M	T	.	.	.	.	.	I	A	R	Q	L	S	V
Query Conservation																																																																						.	.	.	.	.
Alig confidence																																																																						.	.	.	.	.
Template Conservation
Template Sequence		T	L	L	A	L	C	G	A	T	L	A	T	Y	F	L	S	A	L	F	H	K	G	K	A	S	I	V	D	M	A	N	A	A	L	A	G	G	V	A	I	G	S	V	C	N	I	V	G	P	V	G	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F	I	Q	P	M	L	E	S	K	A	K	T
Template Known Secondary structure																					T	T	T											T	T							T	T	T	T	T	T	S																						T									S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	N	L	N	L	L	G	F	V	T	L	I	Y	G	I	G	Q	I	L	G	P	A	L	T	S	M	L	S	N	G	T	S	A	L	A	S	A	T	L	C	G	A	A	A	L	F	I	A	A	L	I	S	T	V	Q	L	F	K	L	Q	V	V
Query Conservation
Alig confidence																												.	.	.
Template Conservation																												.	.	.
Template Sequence		I	D	T	C	G	V	H	N	L	H	G	L	P	G	L	L	G	G	F	S	A	I	L	I	V	P	.	.	.	G	I	A	V	A	Q	L	T	G	I	G	I	T	L	A	L	A	L	I	G	G	V	I	A	G	A	L	I	K	L	T	G	T	T
Template Known Secondary structure				T	T						T	T														S	T	.	.	.	T																													T	T
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340				.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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