|   |
857 | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . | . | . | . | . | . | . | 880 | . | . | . | . | . | . | . | . | . | 890 | . | . | . | . | . | . | . | . | . | 900 | |
|
. | . | . | . | . | . | . | . | . | 910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
| . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | F | D | T | A | A | M | S | I | G | A | L | S | P | E | A | H | E | A | L | A | E | A | M | N | S | I | G | G | N | S | N | S | G | E | G | G | E | D | P | A | R | Y | G | . |
. |
T | N | K | V | S | R | I | K | Q | V | A | S | G | R | F | G | V | T | P | A | Y | L | V | N | A | D | V | I | Q | I | K | V | A | Q |
Query Conservation |   |
|
|   |
|
|   |
|
|   |
|
|
|
|   |   |
|   |   |
|
|
|   |
|   |   |   |   |
|   |   |
|   |
|
|
|
|
|
|   |
|   |   |   |   | . | . |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |
|   |   |
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |
|   |
|   |   |   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
P | F | V | I | A | G | R | T | Y | G | S | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | L | V | G | T | G | K | Y | K | D | L | D | E | T | R | R | A | I | E | A | S | G | A | E | I | V | T | V | A | V | R | R | T | N | I | P | P | D | R | Y | T | I | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|  |  |  | T | T |  |  |  | S |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
| S |
| S | S | S |  |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  |  | G | G | G |
|
|
|
| T | T | T | S |  |  |  | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1010 | . | . | . | . | . | . | . | . | . | 1020 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | |
|
|
|
|
|
|
|
|
  |
  |   |
935 | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . | . | . | . | |
. | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | K | P | G | E | G | G | Q | L | P | G | D | K | V | T | P | Y | I | A | K | L | R | Y | S | V | P | G | V | T | L | I | S | P | P | P | H | H | D | I | Y | S | I | . |
E | D | L | A | Q | L | I | F | D | L | K | Q | V | N | P | K | A | M | I | S | V | K | L | V | S | E | P | G | V | G | T | I | A | T | G | V |
Query Conservation |   |
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |
|
|   |   |
|   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |
|   |
|   |
|
|
|
|   |   |   |
|
|
|
|
|
|   |
|
|
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
| . |   |   |
| . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
. |
. |
. |
P | N | T | A | G | C | Y | D | A | V | E | A | V | R | T | C | R | L | A | R | E | L | L | D | G | H | N | L | V | K | L | E | V | L | A | D | Q | K | T | L | F | P | N | V | V | E | T | L | K | A | A | E | Q | L | V | K | D | G | . |
F | D | V | . |
M | V | Y | T | S | D | D | P | I | I | A | R | Q | L |
Template Known Secondary structure |   |
. | . | . |  |  |
| T | T |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | S |
|
|  |  |  |  |
|
| B | S |
| T | T | T |
|
| B |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | . |
|  |  | . |  |  |  |  |
| S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
1078 | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . | 1130 | . | . | . | . | . | |
. | . | . | |
. | 1140 | . | . | . | . | . | . | . | . | . | 1150 | . | . |
  |
  |   |
1014 | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | K | A | Y | A | D | L | I | T | I | A | G | Y | D | G | G | T | G | A | S | P | L | S | S | V | K | Y | A | G | C | P | W | E | L | G | L | V | E | T | Q | Q | A | L | V | A | N | G | L | R | H | K | I | R | L | Q | V | D | G | G | L | K | T | G | V | D | I | I | K | A | A | I | L | G | A | E | S | F | G | F | G |
Query Conservation |   |
|
|
|   |
|
|   |
|   |
|
|
|   |
|
|
|
|
|
|
|   |   |   |
|   |
|   |   |
|   |
|   |
|   |
|
|   |
|   |   |   |   |
|   |   |   |
|
|
|   |   |
|   |
|   |   |
|
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |
|   |
|   |
|   |   |
|
|   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   | . | . | . | . | . | . | . |   |
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|   |
Template Sequence |   |
A | E | I | G | C | I | A | V | M | P | L | A | G | L | I | G | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | L | G | I | C | N | P | Y | N | L | R | I | I | L | E | E | A | . |
. |
. |
. |
. |
. |
. |
K | V | P | V | L | V | D | A | G | V | G | T | A | S | D | A | A | I | A | M | E | L | G | C | E | A | V | L | M | N |
Template Known Secondary structure |   |
 |  | S |
|
| S |  |  |  |  |
| S | S | S | T | T |
| . | . | . | . | . | . | . | . | . |
|
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | S | S |
| B |  |  |  | S |
|
|
| S |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1153 | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
1170 | . | . | . | . | . | . | . | . | . | 1180 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 1190 | . | . | . | . | . | . | . | . | . | 1200 | . | . | . | . | . | . | . | . | . | 1210 | . | . | . | . | . | . |
  |
  |   |
1094 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
T | G | P | M |
Query Conservation |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|
|
|   |
Template Sequence |   |
T | A | I | A |
Template Known Secondary structure |   |
 |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
Template SS confidence |   |
|
|
|
|
  |   |
1217 | . | . | 1220 |
  |