|   |
972 | . | . | |
|
. | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | |
|
|
. | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
H | D | I | . |
. |
Y | S | I | E | D | L | A | Q | L | I | F | D | L | K | Q | V | N | P | K | A | M | I | S | V | K | L | V | S | E | P | G | V | G | T | I | A | T | G | V | A | K | A | Y | . |
. |
. |
A | D | L | I | T | I | A | G | Y | D | G | G | T | G | A | S | P | L | S | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |
|   |
|   |
|
|
|
|   |   |   |
|
|
|
|
|
|   |
|
|
|
|
|   | . | . | . |
|
|   |
|   |
|
|
|   |
|
|
|
|
|
|
|   |   |   |
| . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|
|   |   |
|
|   |
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|   |   |   |   |   |   |
|
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
H | L | Y | E | G | H | D | P | A | T | V | A | F | P | V | Y | L | A | K | Y | V | G | V | K | G | V | V | V | T | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | A | G | A | I | N | P | E | F | K | P | G | E | I | I | L | V | R | D | I | I | N | F | M | F | R | N | P | L | R | G | P | N | D | E | K | I | G | P | R |
Template Known Secondary structure |   |
| G | G | G | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
| S | T | T |
|
| T | T |
|  |  |  |  |  |  |  |  |  |
| S |
|
|
| T | T |
| S |
|
|
| T | T | T |
|
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
  |   |
1038 | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | |
. | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | K | Y | A | G | C | P | W | E | L | G | L | V | E | T | Q | Q | A | L | V | A | N | G | L | R | H | K | I | R | L | Q | V | D | G | G | L | . |
K | T | G | V | D | I | I | K | A | A | I | L | G | A | E | S | F | G | F | G | T | G | P | M | V | A | L | G | C | K | Y | L | R | I | C | H | L | N | N | C | A | T | G |
Query Conservation |   |
  |
|   |   |
|   |
|   |
|   |
|
|   |
|   |   |   |   |
|   |   |   |
|
|
|   |   |
|   |
|   |   |
|
|
|   | . |   |
|   |   |
|
|   |   |
|   |   |
|
|
|   |   |   |   |   |
|
|   |   |
|
|
|   |
|
|
|
|   |
|   |
|
|   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . |   |   |   |   |   |   |
|   |
|   |   |   |   |
|
|   |
|
|
|   |
|
|   |   |   |   |
|   |   |
|
|
|   |
|
|
|
|   |
|   |
|
| . | . | . | . |   |
|
|   |   |   |
|
|   |   |   |   |
|   |
Template Sequence |   |
F | P | D | M | S | S | V | V | D | P | E | W | A | R | K | I | Q | E | . |
. |
R | L | S | L | K | E | G | V | Y | I | G | V | L | G | P | S | Y | E | T | P | A | E | I | R | V | F | E | K | L | G | A | D | L | V | G | M | S | T | V | P | E | V | . |
. |
. |
. |
I | A | A | K | H | C | G | L | K | V | V | V | F | S |
Template Known Secondary structure |   |
S |
|
|
| T | T |
| S |
|  |  |  |  |  |  |  |  |  | . | . |  |  |
|
|  |  |  |  |  |  |  |
|
|
| S | S |
|
|
|  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  | S | S | S |  |  |  |  | . | . | . | . |  |  |  |  |  |  | T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|  |  |  |  | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
|
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | |
|
|
|
. | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
  |
  |   |
1117 | . | . | 1120 | . | . | . | . | . | . | . | . | . | 1130 | . | . | |
. | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | . | . | 1150 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | A | T | Q | D | D | K | L | R | K | N | H | Y | H | G | L | . |
P | F | K | V | T | N | Y | F | E | F | I | A | R | E | T | R | E | L | M | A | Q | L |
Query Conservation |   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |
|   | . |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|
Alig confidence |   |
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
| . | . | . | . | . | . | . |
|   |
|   |
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
Template Sequence |   |
C | V | T | . |
. |
. |
. |
. |
. |
. |
N | M | A | A | G | I | S | H | E | E | V | V | R | T | T | K | M | A | Q | G | K | I | E | K | A | L | T | T | A |
Template Known Secondary structure |   |
 |  |  | . | . | . | . | . | . | . |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  | . | . | . | . | . | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
225 | . | . | |
|
|
|
|
|
|
. | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . |
  |