Job Description P09831 Confidence 99.87% Date Wed Jan 25 15:20:14 GMT 2012 Rank 11 Aligned Residues 313 % Identity 16% Template d1tb3a1 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.30

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		799	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.						.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.						.	.	.	860	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.																										.	.	.	.	.
Query SS confidence																																			.	.	.	.	.																										.	.	.	.	.
Query Sequence		V	V	R	T	L	Q	Q	A	V	Q	S	G	E	Y	S	D	Y	Q	E	Y	A	K	L	V	N	E	R	P	A	T	T	L	R	.	.	.	.	.	D	L	L	A	I	T	P	G	E	N	A	V	N	I	A	D	V	E	P	A	S	E	L	F	K	.	.	.	.	.	R	F	D	T	A	A	M	S	I	G	A	L
Query Conservation																																			.	.	.	.	.																										.	.	.	.	.
Alig confidence																																			.	.	.	.	.								.																		.	.	.	.	.
Template Conservation																																															.
Template Sequence		C	L	A	D	F	K	A	H	A	Q	K	Q	L	S	K	T	S	W	D	F	I	E	G	E	A	D	D	G	I	T	Y	S	E	N	I	A	A	F	K	R	I	R	L	R	P	.	R	Y	L	R	D	M	S	K	V	D	T	R	T	T	I	Q	G	Q	E	I	S	A	P	I	C	I	S	P	T	A	F	H	S	I
Template Known Secondary structure		S											T	S													T	T																B			.			S	S			S	S		B						T	T				S	S	S							S		G	G	G
Template Predicted Secondary structure																																															.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		869		870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.					.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.
Predicted Secondary structure			.																									.	.	.	.
Query SS confidence			.																									.	.	.	.
Query Sequence		S	.	P	E	A	H	E	A	L	A	E	A	M	N	S	I	G	G	N	S	N	S	G	E	G	G	.	.	.	.	E	D	P	A	R	Y	G	T	N	K	V	S	R	I	K	Q	V	A	S	G	R	F	G	V	T	P	A	Y	L	V	N	A	D	V	I	Q	I	K	V	A	Q	G	A	K	P	G	E	G	G	Q
Query Conservation			.																									.	.	.	.
Alig confidence			.																									.	.	.	.																																												.	.	.
Template Conservation																																																																											.	.	.
Template Sequence		A	W	P	D	G	E	K	S	T	A	R	A	A	Q	E	A	N	I	C	Y	V	I	S	S	Y	A	S	Y	S	L	E	D	I	V	A	A	A	P	E	G	F	R	W	F	Q	L	Y	M	K	S	D	W	D	F	N	K	Q	M	V	Q	R	A	E	A	L	G	F	K	A	L	V	I	T	.	.	.	I	D	T	P
Template Known Secondary structure		T		T	T	T												T							T	T		S	S									S	T	T											S		T	T													T								.	.	.		S		S
Template Predicted Secondary structure																																																																											.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.
		944	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	G	D	K	V	T	P	Y	I	A	K	L	R	Y	S	V	P	G	V	T	L	I	S	P	P	P	H	H	D	I	Y	S	I	E	D	L	A	Q	L	I	F	D	L	K	Q	V	N	P	K	A	M	I	S	V	K	L	V	S	E	P	G	V	G	T	I	A	T	G	V	A	K	A	Y	A	D	L	I	T	I
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.														.							.	.	.
Template Conservation																																.	.	.	.	.	.	.	.														.							.	.	.
Template Sequence		V	L	G	N	R	R	R	D	K	R	N	Q	L	N	L	E	A	K	D	L	R	A	L	K	E	A	S	F	C	W	.	.	.	.	.	.	.	.	N	D	L	S	L	L	Q	S	I	T	R	L	P	.	I	I	L	K	G	I	.	.	.	L	T	K	E	D	A	E	L	A	M	K	H	N	V	Q	G	I	V	V
Template Known Secondary structure		S										T	T								S											.	.	.	.	.	.	.	.								T	T			S		.							.	.	.		S										T	T		S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.														.							.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.									190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		1024	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	Y	D	G	G	T	G	A	S	P	L	S	S	V	K	Y	A	G	C	P	W	E	L	G	L	V	E	T	Q	Q	A	L	V	A	N	G	L	R	H	K	I	R	L	Q	V	D	G	G	L	K	T	G	V	D	I	I	K	A	A	I	L	G	A	E	S	F	G	F	G	T	G	P	M	V	A	L	G	C	K
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.																.	.	.	.	.																																										.
Template Conservation												.	.	.	.	.	.	.	.																.	.	.	.	.																																										.
Template Sequence		S	N	H	G	G	R	Q	L	D	E	.	.	.	.	.	.	.	.	V	S	A	S	I	D	A	L	R	E	V	V	A	A	V	.	.	.	.	.	K	G	K	I	E	V	Y	M	D	G	G	V	R	T	G	T	D	V	L	K	A	L	A	L	G	A	R	C	I	F	L	G	R	P	I	L	W	G	L	A	C	.
Template Known Secondary structure				G	G	G	T	S	S		S	.	.	.	.	.	.	.	.	S															.	.	.	.	.	T	T	S	S						S	S			S										T	T		S					S										.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.																.	.	.	.	.																																										.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.									.	.	.	.	.	260	.	.	.	.	.	.	.	.	.						270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		1104	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	R	I	C	H	L	N	N	C	A	T	G	V	A	T	Q	D	D	K	L	R	K	N	H	Y	H	G	L	P	F	K	V	T	N	Y	F	E	F	I	A	R	E	T	R	E	L	M	A	Q	L	G	V	T	R	L	V	D	L	I	G	R	T	D	L	L	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	E	D	G	V	K	E	V	L	D	I	L	T	A	E	L	H	R	C	M	T	L	S	G	C	Q	S	V	A	E	I	.	.	S	P	D	L	I	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									T		S	B	G	G	G		.	.		G	G	G	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template SS confidence
																													311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.			.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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