Job Description P09831 Confidence 99.90% Date Wed Jan 25 15:20:14 GMT 2012 Rank 9 Aligned Residues 286 % Identity 19% Template d1p0ka_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.90

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		832	.	.	.	.	.	.	.	840	.	.		.	.	.	.	.	.	.		850	.					.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.			.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.				.	.	.	.	.	.	.	.	900
Predicted Secondary structure													.								.			.	.	.	.																	.	.																									.	.	.
Query SS confidence													.								.			.	.	.	.																	.	.																									.	.	.
Query Sequence		D	L	L	A	I	T	P	G	E	N	A	.	V	N	I	A	D	V	E	.	P	A	.	.	.	.	S	E	L	F	K	R	F	D	T	A	A	M	S	I	G	A	.	.	L	S	P	E	A	H	E	A	L	A	E	A	M	N	S	I	G	G	N	S	N	S	G	E	.	.	.	G	G	E	D	P	A	R	Y	G
Query Conservation													.								.			.	.	.	.																	.	.																									.	.	.
Alig confidence													.								.			.	.	.	.																	.	.																									.	.	.
Template Conservation
Template Sequence		D	D	I	T	F	V	H	V	S	L	P	D	L	A	L	E	Q	V	D	I	S	T	K	I	G	E	L	S	S	S	S	P	I	F	I	N	A	M	T	G	G	G	G	K	L	T	Y	E	I	N	K	S	L	A	R	A	A	S	Q	A	G	I	P	L	A	V	G	S	Q	M	S	A	L	K	D	P	S	E	R	L
Template Known Secondary structure		G	G							S						G	G	G		B						T	T				S		S									S																				T									T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		901	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	K	V	S	R	I	K	Q	V	A	S	G	R	F	G	V	T	P	A	Y	L	V	N	A	D	V	I	Q	I	K	V	A	Q	G	A	K	P	G	E	G	G	Q	L	P	G	D	K	V	T	P	Y	I	A	K	L	R	Y	S	V	P	G	V	T	L	I	S	P	P	P	H	H	D	I	Y	S	I	E	D	L
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		S	Y	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	K	E	N	P	N	G	L	I	F	A	N	L	G	S	E	A	T	A	A	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	K	E	A	V	E	M	.	I	G	A	N	A	L	Q	I	H	L	N	V	I	Q	E	I	F	S	G	A
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	S								T	T					.	.	.	.	.	.	.	.	.	.	.	.									.	T	T		S								T	T	T	T			T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		106	.	.	.															110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130													.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		981	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	I	F	D	L	K	Q	V	N	P	K	A	M	I	S	V	K	L	V	S	E	P	G	V	G	T	I	A	T	G	V	A	K	A	Y	A	D	L	I	T	I	A	G	Y	D	G	G	T	G	A	S	P	L	S	S	V	K	Y	A	G	C	P	W	E	L	G	L	V	E	T	Q	Q	A	L	V	A	N	G
Query Conservation
Alig confidence																.																																						.	.	.	.	.	.	.																		.	.	.	.
Template Conservation																.																																						.	.	.	.	.	.	.																		.	.	.	.
Template Sequence		L	K	R	I	E	Q	I	C	S	R	V	S	V	P	.	V	I	V	K	E	V	G	F	G	M	S	K	A	S	A	G	K	L	Y	E	A	G	A	A	A	V	D	I	G	G	R	Q	I	S	F	F	N	.	.	.	.	.	.	.	S	W	G	I	S	T	A	A	S	L	A	E	I	R	S	E	F	.	.	.	.
Template Known Secondary structure													S	S		.							S	S														T		S									G	G	G	G	T	.	.	.	.	.	.	.	T		S															.	.	.	.
Template Predicted Secondary structure																.																																						.	.	.	.	.	.	.																		.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.								.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		1061	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	H	K	I	R	L	Q	V	D	G	G	L	K	T	G	V	D	I	I	K	A	A	I	L	G	A	E	S	F	G	F	G	T	G	P	M	V	A	L	G	C	K	Y	L	R	I	C	H	L	N	N	C	A	T	G	V	A	T	Q	D	D	K	L	R	K	N	H	Y	H	G	L	P	F	K	V	T	N	Y	F
Query Conservation
Alig confidence		.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	P	A	S	T	M	I	A	S	G	G	L	Q	D	A	L	D	V	A	K	A	I	A	L	G	A	S	C	T	G	M	A	G	H	F	L	K	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	S	G	E	E	G	L	L	E	E	I
Template Known Secondary structure		.	.	T	T	S						S	S			S										T	T		S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.																													.	.	290	.	.	.	.	.	.	.	.	.
		1141	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.		.	.	1180	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		E	F	I	A	R	E	T	R	E	L	M	A	Q	L	G	V	T	R	L	V	D	L	I	G	R	T	D	L	L	K	E	L	D	G	F	T	A	.	K	Q	Q	K	L	A	L	S	K	L
Query Conservation																																							.
Alig confidence																								.															.
Template Conservation																								.
Template Sequence		Q	L	I	L	E	E	L	K	L	I	M	T	V	L	G	A	R	T	I	A	D	L	.	Q	K	A	P	L	V	I	K	G	E	T	H	H	W	L	T	E	R	G	V	N	T	S	S	Y
Template Known Secondary structure																T			B					.	T	T																T	T			S
Template Predicted Secondary structure																								.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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