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Job DescriptionP09831
Confidence100.00%DateWed Jan 25 15:20:14 GMT 2012
Rank3Aligned Residues753
% Identity48%Templated1ofda2
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   443......450.........460.........470.........480.........490.........500.........510.........520..
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Query Sequence  EVGSRELDDDTLASYQKQFNYSAEELDSVIRVLGENGQEAVGSMGDDTPFAVLSSQPRIIYDYFRQQFAQVTNPPIDPLR
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Template Conservation             
      



 
       


  
 
 




 
 


 

     
  



 












Template Sequence  AEKTLFNDAQTVLQQQAAFGYTAEDVEMVVVPMASQGKEPTFCMGDDTPLAVLSHKPRLLYDYFKQRFAQVTNPPIDPLR
Template Known Secondary structure 

S
S
S
TT

TSS


S


S

TTT
SS


GGGG



SSS



TTT
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   432.......440.........450.........460.........470.........480.........490.........500.........510.
 
   523......530.........540.........550.........560.........570.........580..... ....590.........600.
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Query Sequence  EAHVMSLATSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLTTMKEEHYRADTLDITFDVT. KTTLEATVKELCDKAE
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Template Sequence  ENLVMSLAMFLGKRGNLLEPKAESARTIKLRSPLVNEVELQAIKT. . . GQLQVAEVSTLYDLDGVNSLEDALTNLVKTAI
Template Known Secondary structure  TGGG
B

S



SSS

GGGG

S
SB

...SSS


SSS

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...









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   512.......520.........530.........540.........550...... ...560.........570.........580........
 
   602.......610....... ..620.........630.........640.........650.........660.........670.......
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Query Sequence  KMVRSGTVLLVLSDRN. . . . IAKDRLPVPAPMAVGAIQTRLVDQSLRCDANIIVETASARDPHHFAVLLGFGATAIYPYL
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Template Sequence  ATVQAGAEILVLTDRPNGAILTENQSFIPPLLAVGAVHHHLIRAGLRLKASLIVDTAQCWSTHHFACLVGYGASAICPYL
Template Known Secondary structure  TT
SSSGGG



TT

TT
GGG

SS

STT
S
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   589590.........600.........610.........620.........630.........640.........650.........660........
 
   678.680......... 690.........700.........710.........720.........730.........740.......
Predicted Secondary structure 

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Query Sequence  AYETLGRLVDTH. . . . . . . . . . AIAKDYRTVMLNYRNGINKGLYKIMSKMGISTIASYRCSKLFEAVGLHDDVVGLCFQG
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Template Sequence  ALESVRQWWLDEKTQKLMENGRLDRIDLPTALKNYRQSVEAGLFKILSKMGISLLASYHGAQIFEAIGLGAELVEYAFAG
Template Known Secondary structure  S
TTSS




TT

BT


SSB
STT
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   669670.........680.........690.........700.........710.........720.........730.........740........
 
   748.750.........760.........770.........780.........790.........800.........810.........820.......
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Query Sequence  AVSRIGGASFEDFQQDLLNLSKRAWLARKPISQGGLLKYVHGGEYHAYNPDVVRTLQQAVQSGEYSDYQEYAKLVNERPA
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Template Conservation 
 
 
 
     
  
       
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Template Sequence  TTSRVGGLTIADVAGEVMVFHGMAFKK. . . LENFGFVNYRPGGEYHMNSPEMSKSLHKAVAAYD. . HYELYRQYLKDRPV
Template Known Secondary structure 


TT

B



...



SSSS

TTSS

S



..T

S
Template Predicted Secondary structure 









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..



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   749750.........760.........770..... ....780.........790.........800......... 810.........820...
 
   828.830.........840.........850.........860.........870.........880.........890.........
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Query Sequence  TTLRDLLAITPGENAVNIADVEPASELFKRFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARY. . . . . . . .
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Template Sequence  TALRDLLDFNADQPAISLEEVESVESIVKRFCTGGMSLGALSREAHETLAIAMNRLGAKSNSGEGGEDVVRYLTLDDVDS
Template Known Secondary structure 
SGGGG

SS



GGGS

TT


B
TTTS
T
B

TT


GGGGS





T
Template Predicted Secondary structure 














































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   840.........850.........860.........870.........880.........890.........900.........910.........
 
   900.........910.........920.........930.........940.........950.........960....
Predicted Secondary structure  ...............









































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Query Sequence  . . . . . . . . . . . . . . . GTNKVSRIKQVASGRFGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVT
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Template Sequence  EGNSPTLPHLHGLQNGDTANSAIKQIASGRFGVTPEYLMSGKQLEIKMAQGAKPGEGGQLPGKKVSEYIAMLRRSKPGVT
Template Known Secondary structure  TS

TTSTT

S

TT




S
TT
TT


S


TTSTTS


GGG

TS
TT

Template Predicted Secondary structure 






















































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   920.........930.........940.........950.........960.........970.........980.........990.........
 
   965....970.........980.........990.........1000.........1010.........1020.........1030.........1040....
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Query Sequence  LISPPPHHDIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSVKYAGCP
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Template Sequence  LISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSP
Template Known Secondary structure 

SS
TT
SS
TTS
STTTT
S
TT


SSB


Template Predicted Secondary structure 





































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   1000.........1010.........1020.........1030.........1040.........1050.........1060.........1070.........
 
   1045....1050.........1060.........1070.........1080.........1090.........1100.........1110.........1120....
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Query Sequence  WELGLVETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKL
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Template Sequence  WELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEGCIMARVCHTNNCPVGVATQQERL
Template Known Secondary structure  TT
GGG
SS

STT
S
STT





GGGT

TTSSS


Template Predicted Secondary structure 

























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   1080.........1090.........1100.........1110.........1120.........1130.........1140.........1150.........
 
   1125....1130.........1140.........1150.........1160.........1170..... ....1180.........1190.........1200...
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Query Sequence  RKNHYHGLPFKVTNYFEFIARETRELMAQLGVTRLVDLIGRTDLLKELDGF. TAKQQKLALSKLLETAEPHPGKALYCTE
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Template Sequence  RQR. FKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGRTDLLKVRSDVQLSKTQNLTLDCLLNLPDTKQNRQWLNHE
Template Known Secondary structure  TT.



T
S
GGGTTT
GGG
SS


SSSS








SS

GGG


Template Predicted Secondary structure  .





























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   1160.. .......1170.........1180.........1190.........1200.........1210.........1220.........1230........
 
   1204
Predicted Secondary structure 
Query SS confidence 
Query Sequence  N
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  P
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   1239
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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