Phyre 2 alignment of P09831 with d1jr1a1

Job Description P09831
Confidence 99.69% Date Wed Jan 25 15:20:14 GMT 2012

Rank 32 Aligned Residues 306

% Identity 17% Template d1jr1a1

SCOP info TIM beta/alpha-barrel Inosine monophosphate dehydrogenase (IMPDH) Inosine monophosphate dehydrogenase (IMPDH)

Resolution 2.60

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.							.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.
Query Sequence	K	L	V	N	E	R	P	A	T	T	L	R	D	L	L	A	I	T	P	G	E	N	A	V	N	I	A	D	V	E	P	A	S	E	L	F	K	R	.	.	.	.	.	.	F	D	T	A	A	M	S	I	G	A	L	S	P	E	A	H	E	A	L	A	E	A	M	N	S	I	G	G	N	S	N	S	G	E	G	G
Query Conservation																																							.	.	.	.	.	.
Alig confidence												.																											.	.	.	.	.	.												.	.	.	.	.
Template Conservation												.																																												.	.	.	.	.
Template Sequence	Q	L	F	N	C	G	D	G	L	T	Y	.	N	D	F	L	I	L	P	G	Y	I	D	F	T	A	D	Q	V	D	L	T	S	A	L	T	K	K	I	T	L	K	T	P	L	V	S	S	P	M	D	T	V	T	E	.	.	.	.	.	A	G	M	A	I	A	M	A	L	T	G	G	I	G	F	I	H	H	N	C
Template Known Secondary structure			T	S	S						G	.	G	G										S		G	G	G		B					S	S	S	S				S	S								T	T	T		S	.	.	.	.	.											T								S	S
Template Predicted Secondary structure												.																																												.	.	.	.	.
Template SS confidence
	22	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.

	894	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	D	P	A	R	Y	G	T	N	K	V	S	R	I	K	Q	V	A	S	G	R	F	G	V	T	P	A	Y	L	V	N	A	D	V	I	Q	I	K	V	A	Q	G	A	K	P	G	E	G	G	Q	L	P	G	D	K	V	T	P	Y	I	A	K	L	R	Y	S	V	P	G	V	T	L	I	S	P	P	P	H	H	D
Query Conservation
Alig confidence											.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	T	P	E	F	Q	A	N	E	V	R	.	.	K	V	K	K	Y	E	Q	Y	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	K	D	A	K	K	Q	L	L	C	G	A	A	I	G	T	H	E	D	D	K	Y	R	L	D	L	L	A	L	A	G	V	D	V	V	V	L	D
Template Known Secondary structure											.	.				T	S				T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B		T	T	S		B								S	S	T													T
Template Predicted Secondary structure											.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	96	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.																				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

	974	.			.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence	I	Y	.	.	S	I	E	D	L	A	Q	L	I	F	D	L	K	Q	V	N	P	K	A	M	I	S	V	K	L	V	S	E	P	G	V	G	T	I	A	T	G	V	A	K	A	Y	A	D	L	I	T	I	A	G	Y	D	G	G	T	G	A	S	P	L	S	S	V	K	Y	A	G	C	P	W	E	L	G	L	V	E
Query Conservation			.	.
Alig confidence			.	.																												.	.	.																																.	.
Template Conservation																																.	.	.																																.	.
Template Sequence	S	S	Q	G	N	S	I	F	Q	I	N	M	I	K	Y	M	K	E	K	Y	P	N	L	Q	V	I	G	G	N	V	V	.	.	.	T	A	A	Q	A	K	N	L	I	D	A	G	V	D	A	L	R	V	G	M	G	C	G	S	I	C	I	T	Q	E	V	.	.	L	A	C	G	R	P	Q	A	T	A	V	Y	K
Template Known Secondary structure		S	S			S														S	T	T										.	.	.	S											T		S						S	S		S	T	T	B						.	.
Template Predicted Secondary structure																																.	.	.																																.	.
Template SS confidence
	275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.				.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.			.	.	.	340	.	.	.	.	.	.	.	.	.

	1052	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.				.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.						.	.
Predicted Secondary structure																																																.	.	.																								.	.	.	.	.
Query SS confidence																																																.	.	.																								.	.	.	.	.
Query Sequence	T	Q	Q	A	L	V	A	N	G	L	R	H	K	I	R	L	Q	V	D	G	G	L	K	T	G	V	D	I	I	K	A	A	I	L	G	A	E	S	F	G	F	G	T	G	P	M	V	.	.	.	A	L	G	C	K	Y	L	R	I	C	H	L	N	N	C	A	T	G	V	A	T	Q	D	.	.	.	.	.	D	K
Query Conservation																																																.	.	.																								.	.	.	.	.
Alig confidence										.	.	.	.																																			.	.	.																								.	.	.	.	.
Template Conservation										.	.	.	.
Template Sequence	V	S	E	Y	A	R	R	F	G	.	.	.	.	V	P	V	I	A	D	G	G	I	Q	N	V	G	H	I	A	K	A	L	A	L	G	A	S	T	V	M	M	G	S	L	L	A	A	T	T	E	A	P	G	E	Y	F	F	S	D	G	I	R	L	K	K	Y	R	G	M	G	S	L	D	A	M	I	K	V	A	Q
Template Known Secondary structure						G	G	G	T	.	.	.	.							S				S										T	T		S					S	T	T	T	T	T	B	T	T	S	S	S					S	S	S									T	T	S	T	T	T
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
	350	.	.	.	.	.	.	.	.					.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.

	1124	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	R	K	N	H	Y	H	G	L	P	F	K	V	T	N	Y	F	E	F	I	A	R	E	T	R	E	L	M	A	Q	L	G	V	T	R	L	V	D	L
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence	G	V	S	G	.	A	V	Q	D	K	G	S	I	H	K	F	V	P	Y	L	I	A	G	I	Q	H	S	C	Q	D	I	G	A	K	S	L	T	Q	V
Template Known Secondary structure	B				.						B																				T	T		S	B
Template Predicted Secondary structure					.
Template SS confidence
	442	.	.	.		.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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