Job Description P09831 Confidence 100.00% Date Wed Jan 25 15:20:14 GMT 2012 Rank 4 Aligned Residues 752 % Identity 47% Template d1ea0a2 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 3.0

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		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	R	L	V	P	F	E	D	L	P	D	E	E	V	G	S	R	E	L	D	D	D	T	L	A	S	Y	Q	K	Q	F	N	Y	S	A	E	E	L	D	S	V	I	R	V	L	G	E	N	G	Q	E	A	V	G	S	M	G	D	D	T	P	F	A	V	L	S	S	Q	P	R	I	I	Y	D	Y	F	R	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	H	L	D	E	L	V	K	T	A	S	L	K	G	E	P	S	D	M	D	K	A	E	L	R	R	R	Q	Q	A	F	G	L	T	M	E	D	M	E	L	I	L	H	P	M	V	E	D	G	K	E	A	I	G	S	M	G	D	D	S	P	I	A	V	L	S	D	K	Y	R	G	L	H	H	F	F	R	Q	N
Template Known Secondary structure			B		T	T									T	T							T									T	T	T								T	T	T							S	S						S				S			G	G	G		S	S				G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		F	A	Q	V	T	N	P	P	I	D	P	L	R	E	A	H	V	M	S	L	A	T	S	I	G	R	E	M	N	V	F	C	E	A	E	G	Q	A	H	R	L	S	F	K	S	P	I	L	L	Y	S	D	F	K	Q	L	T	T	M	K	E	E	H	Y	R	A	D	T	L	D	I	T	F	D	V	T	K	.	.	T
Query Conservation																																																																															.	.
Alig confidence																																																												.	.																		.	.
Template Conservation																																																												.	.
Template Sequence		F	S	Q	V	T	N	P	P	I	D	S	L	R	E	R	R	V	M	S	L	K	T	R	L	G	N	L	G	N	I	L	D	E	D	E	T	Q	T	R	L	L	Q	L	E	S	P	V	L	T	T	A	E	F	R	A	M	R	D	.	.	Y	M	G	D	T	A	A	E	I	D	A	T	F	P	V	D	G	G	P	E
Template Known Secondary structure					S	S	S					T	T	T	T	G	G	G								S			S		T	T			S	G	G	G	S		S				S		S	B												.	.			G	G	G										S	T	T		T	T
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560			.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	E	A	T	V	K	E	L	C	D	K	A	E	K	M	V	R	S	G	T	V	L	L	V	L	S	D	R	N	I	A	K	D	R	L	P	V	P	A	P	M	A	V	G	A	I	Q	T	R	L	V	D	Q	S	L	R	C	D	A	N	I	I	V	E	T	A	S	A	R	D	P	H	H	F	A	V	L	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	R	D	A	L	R	R	I	R	Q	E	T	E	D	A	V	R	G	G	A	T	H	V	I	L	T	D	E	A	M	G	P	A	R	A	A	I	P	A	I	L	A	T	G	A	V	H	T	H	L	I	R	S	N	L	R	T	F	T	S	L	N	V	R	T	A	E	G	L	D	T	H	Y	F	A	V	L	I	G
Template Known Secondary structure																					T									T	T		B	T	T																			T	T	T		G	G	G								S	S			S									T
Template Predicted Secondary structure
Template SS confidence
		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
		668	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.		.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		F	G	A	T	A	I	Y	P	Y	L	A	Y	E	T	L	G	R	L	V	D	T	H	A	I	A	.	K	D	Y	R	T	V	M	L	N	Y	R	N	G	I	N	K	G	L	Y	K	I	M	S	K	M	G	I	S	T	I	A	S	Y	R	C	S	K	L	F	E	A	V	G	L	H	D	D	V	V	G	L	C	F	Q
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		V	G	A	T	T	V	N	A	Y	L	A	Q	E	A	I	A	E	R	H	R	R	G	L	F	G	S	M	P	L	E	K	G	M	A	N	Y	K	K	A	I	D	D	G	L	L	K	I	M	S	K	M	G	I	S	V	I	S	S	Y	R	G	G	G	N	F	E	A	I	G	L	S	R	A	L	V	A	E	H	F	P
Template Known Secondary structure		T	T		S																T	T	T	T	T	T	T																								T	T	T								T	T	S						S	S	B									S	S
Template Predicted Secondary structure
Template SS confidence
		661	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740
		747	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.		.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		G	A	V	S	R	I	G	G	A	S	F	E	D	F	Q	Q	D	L	L	N	L	S	K	R	A	W	L	A	R	K	.	P	I	S	Q	G	G	L	L	K	Y	V	H	G	G	E	Y	H	A	Y	N	P	D	V	V	R	T	L	Q	Q	A	V	Q	S	G	E	Y	S	D	Y	Q	E	Y	A	K	L	V	N	E	R
Query Conservation																																.
Alig confidence																																.
Template Conservation
Template Sequence		A	M	V	S	R	I	S	G	I	G	L	N	G	I	Q	K	K	V	L	E	Q	H	A	T	A	Y	N	E	E	V	V	A	L	P	V	G	G	F	Y	R	F	R	K	S	G	D	R	H	G	W	E	G	G	V	I	H	T	L	Q	Q	A	V	T	N	D	S	Y	T	T	F	K	K	Y	S	E	Q	V	N	K	R
Template Known Secondary structure		S				S	S			B																		S	S			S	S						S	S	S			S	S	S	S			S	S															T														T	S
Template Predicted Secondary structure
Template SS confidence
		741	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820
		826	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.						900
Predicted Secondary structure																																																																												.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.
Query Sequence		P	A	T	T	L	R	D	L	L	A	I	T	P	G	E	N	A	V	N	I	A	D	V	E	P	A	S	E	L	F	K	R	F	D	T	A	A	M	S	I	G	A	L	S	P	E	A	H	E	A	L	A	E	A	M	N	S	I	G	G	N	S	N	S	G	E	G	G	E	D	P	A	R	Y	.	.	.	.	.	G
Query Conservation																																																																												.	.	.	.	.
Alig confidence																																																																												.	.	.	.	.
Template Conservation
Template Sequence		P	P	M	Q	L	R	D	L	L	E	L	R	S	T	K	A	P	V	P	V	D	E	V	E	S	I	T	A	I	R	K	R	F	I	T	P	G	M	S	M	G	A	L	S	P	E	A	H	G	T	L	N	V	A	M	N	R	I	G	A	K	S	D	S	G	E	G	G	E	D	P	A	R	F	R	P	D	K	N	G
Template Known Secondary structure					S	G	G	G	G						S	S					G	G	G	S								T	T								B	T	T	B															T	T							T	T				G	G	G	S	S	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		821	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900
		901	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	K	V	S	R	I	K	Q	V	A	S	G	R	F	G	V	T	P	A	Y	L	V	N	A	D	V	I	Q	I	K	V	A	Q	G	A	K	P	G	E	G	G	Q	L	P	G	D	K	V	T	P	Y	I	A	K	L	R	Y	S	V	P	G	V	T	L	I	S	P	P	P	H	H	D	I	Y	S	I	E	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	N	W	N	S	A	I	K	Q	V	A	S	G	R	F	G	V	T	A	E	Y	L	N	Q	C	R	E	L	E	I	K	V	A	Q	G	A	K	P	G	E	G	G	Q	L	P	G	F	K	V	T	E	M	I	A	R	L	R	H	S	T	P	G	V	M	L	I	S	P	P	P	H	H	D	I	Y	S	I	E	D	L
Template Known Secondary structure			B				S						S	S		T	T							T	S		S									T	T	S	T	T	T						G	G	G										T			T	T							S	S		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		901	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
		981	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	I	F	D	L	K	Q	V	N	P	K	A	M	I	S	V	K	L	V	S	E	P	G	V	G	T	I	A	T	G	V	A	K	A	Y	A	D	L	I	T	I	A	G	Y	D	G	G	T	G	A	S	P	L	S	S	V	K	Y	A	G	C	P	W	E	L	G	L	V	E	T	Q	Q	A	L	V	A	N	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	L	I	Y	D	L	K	Q	I	N	P	D	A	K	V	T	V	K	L	V	S	R	S	G	I	G	T	I	A	A	G	V	A	K	A	N	A	D	I	I	L	I	S	G	N	S	G	G	T	G	A	S	P	Q	T	S	I	K	F	A	G	L	P	W	E	M	G	L	S	E	V	H	Q	V	L	T	L	N	R
Template Known Secondary structure													T	T											T	T											T	T		S							T	T				S	S			T	T					S																	T	T	T
Template Predicted Secondary structure
Template SS confidence
		981	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060
		1061	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	H	K	I	R	L	Q	V	D	G	G	L	K	T	G	V	D	I	I	K	A	A	I	L	G	A	E	S	F	G	F	G	T	G	P	M	V	A	L	G	C	K	Y	L	R	I	C	H	L	N	N	C	A	T	G	V	A	T	Q	D	D	K	L	R	K	N	H	Y	H	G	L	P	F	K	V	T	N	Y	F
Query Conservation
Alig confidence																																																																					.
Template Conservation																																																																					.
Template Sequence		L	R	H	R	V	R	L	R	T	D	G	G	L	K	T	G	R	D	I	V	I	A	A	M	L	G	A	E	E	F	G	I	G	T	A	S	L	I	A	M	G	C	I	M	V	R	Q	C	H	S	N	T	C	P	V	G	V	C	V	Q	D	D	K	L	R	Q	K	.	F	V	G	T	P	E	K	V	V	N	L	F
Template Known Secondary structure			T	T	T	S						S	S			S										T	T		S													T							T	T	T	T			T	T	S	S	S				T	T	G	G	G	S	.
Template Predicted Secondary structure																																																																					.
Template SS confidence
		1061	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.		.	.	1130	.	.	.	.	.	.	.	.	.
		1141	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.		.	.	.	.	1180	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		E	F	I	A	R	E	T	R	E	L	M	A	Q	L	G	V	T	R	L	V	D	L	I	G	R	T	D	L	L	K	E	L	D	G	F	.	T	A	K	Q	Q	K	L	A	L
Query Conservation																																					.
Alig confidence																																					.
Template Conservation
Template Sequence		T	F	L	A	E	E	V	R	E	I	L	A	G	L	G	F	R	S	L	N	E	V	I	G	R	T	D	L	L	H	Q	V	D	L	D	L	N	P	R	L	A	Q	V	D	P
Template Known Secondary structure																T		S		S	G	G	G	T	T		G	G	G															S	S
Template Predicted Secondary structure
Template SS confidence
		1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.