Job Description P09831 Confidence 22.86% Date Wed Jan 25 15:20:14 GMT 2012 Rank 352 Aligned Residues 52 % Identity 23% Template c3s7xC_ PDB info PDB header:viral protein Chain: C: PDB Molecule:major capsid protein vp1; PDBTitle: unassembled washington university polyomavirus vp1 pentamer r198k2 mutant Resolution 2.90 Å

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		1271	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	T	A	G	Q	S	F	G	V	W	N	A	G	G	V	E	L	Y	L	T	G	D	A	N	D	Y	V	G	K	G	M	A	G	G	L	I	A	I	R	P	P	V	G	S	A	F	R	S	H	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	I	A	G	P	Q	L	Y	F	W	A	V	G	G	Q	P	L	D	V	L	G	L	A	P	T	E	K	Y	K	G	P	A	Q	Y	T	V	N	P	K	T	N	G	T	V	P	H	V	Y	S	S	S
Template Known Secondary structure				S	B	S										S	S									S	S	S	S					S	S	S	S			S	S	T	T	S				S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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