Job Description P09831 Confidence 98.80% Date Wed Jan 25 15:20:14 GMT 2012 Rank 51 Aligned Residues 180 % Identity 16% Template c3mdnD_ PDB info PDB header:transferase Chain: D: PDB Molecule:glutamine aminotransferase class-ii domain protein; PDBTitle: structure of glutamine aminotransferase class-ii domain protein2 (spo2029) from silicibacter pomeroyi Resolution 2.09 Å

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		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.					.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																																																			.	.	.	.
Query SS confidence																																																			.	.	.	.
Query Sequence		I	Y	K	G	L	C	M	P	T	D	L	P	R	F	Y	L	D	L	A	D	L	R	L	E	S	A	I	C	L	F	H	Q	R	F	S	T	N	T	V	P	R	W	P	L	A	Q	P	F	R	.	.	.	.	Y	L	A	H	N	G	E	I	N	T	I	T	G	N	R	Q	W	A	R	A	R	T	Y	K	F	Q	T
Query Conservation																																																			.	.	.	.
Alig confidence																						.	.												.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation																						.	.												.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	R	D	V	Y	P	A	W	S	D	P	N	L	R	A	V	A	H	H	.	.	V	R	S	G	L	F	L	S	H	V	N	.	.	.	.	.	.	.	.	.	.	N	C	H	P	F	A	A	R	R	W	C	F	X	H	N	G	Q	V	G	G	F	E	A	F	R	K	Q	A	D	X	A	I	A	D	E	F	Y
Template Known Secondary structure						S	S		T	T	T											.	.												.	.	.	.	.	.	.	.	.	.			S					T	T										T	T	G	G	G	G							T	S
Template Predicted Secondary structure																						.	.												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.											.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		P	L	I	P	D	L	H	D	A	A	P	F	V	N	E	T	G	S	D	S	S	S	M	D	N	M	L	E	.	L	L	L	A	G	G	M	D	I	I	R	A	M	R	L	L	V	P	P	A	W	Q	N	N	P	D	M	D	P	E	L	R	A	F	F	D	F	N	S	M	H	M	E	P	W	D	G	P	A	G	I
Query Conservation																														.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.															.			.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.																		.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	Y	R	.	.	.	.	.	.	.	.	.	.	.	K	G	S	T	D	S	E	V	L	F	L	L	A	L	S	E	G	.	.	L	E	H	D	P	H	G	A	L	A	R	A	I	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	G	L	S	R	A	H	G	T	T	P	H	X	R	L	S	A
Template Known Secondary structure		T	T		.	.	.	.	.	.	.	.	.	.	.		S														T	T	.	.	T	T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.									S		S	S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.																		.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.												.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.															170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.				.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		V	M	S	D	G	R	F	A	A	C	N	L	D	R	N	G	L	R	P	A	R	Y	V	I	T	.	.	.	K	D	K	L	I	T	C	A	S	E	V	G	I	W	D	Y	Q	P	D	E	V	V	E	K	G	R	V	G	P	G	E	L	M	V	I	D	T	R	S	G	R	I	L	H
Query Conservation																											.	.	.
Alig confidence																											.	.	.												.	.										.	.	.
Template Conservation																																									.	.										.	.	.
Template Sequence		A	F	S	D	G	Q	T	L	Y	A	A	R	Y	S	S	D	H	I	A	P	S	V	Y	Y	R	Y	S	H	A	R	Q	G	W	A	V	V	S	E	P	.	.	L	E	T	D	E	G	D	W	T	.	.	.	E	L	R	P	G	R	X	L	T	I	G	A	E	G	A	A	E	R	D
Template Known Secondary structure						S	S									S	S	S											T	T	T	T						S	S		.	.				S	S					.	.	.				T	T							T	T
Template Predicted Secondary structure																																									.	.										.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions