Return to main results Retrieve Phyre Job Id

Job DescriptionP09831
Confidence45.09%DateWed Jan 25 15:20:14 GMT 2012
Rank224Aligned Residues164
% Identity16%Templatec3khsB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:purine nucleoside phosphorylase; PDBTitle: crystal structure of grouper iridovirus purine nucleoside2 phosphorylase
Resolution2.38 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   970.... .....980.........990.........1000.........1010....... ..1020...... ...1030......
Predicted Secondary structure 




..













...



...




.....
Query SS confidence 




. .










































. . .








. . .









. . . . .
Query Sequence  PHHDI. . YSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAY. . . ADLITIAGY. . . DGGTGASPLS. . . . .
Query Conservation 




..









  

  
  
 
 



   





 




 ...

 
 


 ...






   .....
Alig confidence 




..
























..........







...








...









.....
Template Conservation 
 
 
 
         
  
  


  

 

..........




   
  




  
 
            
    
Template Sequence  RFHLYEGHTAARATFPMRVFKALGVKIVVLTN. . . . . . . . . . AAGGLNPSYRPGDFMVVRDHINLPGLAGANPLTGPNDD
Template Known Secondary structure 


GGGT

TTT

..........
STT

TT
TT

TT
S


T
Template Predicted Secondary structure 













..........






























Template SS confidence 















































































   81........90.........100.........110.. .......120.........130.........140.........150
 
   1037..1040.........1050.........1060 .........1070. ........1080.........1090.........1100......
Predicted Secondary structure  .....






....




.






Query SS confidence  . . . . .























. . . .










.


































Query Sequence  . . . . . SVKYAGCPWELGLVETQQALVANG. . . . LRHKIRLQVDG. GLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLR
Query Conservation  .....
 
  
 
 
 

 
    
   
....

  
 
  

.
  
  

  
  


     

  


 



 
Alig confidence  .....























....










.


























....



Template Conservation               
  
       
           


    

 


 

 
  
  


 



 
 

.... 

 
Template Sequence  TEGERFPSMTSVYDKTLRKYAISAARELGMSYATHEGVYCCVNGPSFETPAECKILRLMGSDAVGMSTAPET. . . . IVAK
Template Known Secondary structure  TTS
SS


TT
B
T
GGG


SS


TT
SSSS....
Template Predicted Secondary structure 




































....
Template SS confidence 















































































   151........160.........170.........180.........190.........200.........210.........220.. ....
 
   1107..1110.........1120.........1130.........1140.........1150....
Predicted Secondary structure 














Query SS confidence 















































Query Sequence  ICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARETRELMAQL
Query Conservation   

   







   
      
    

        
 
 
 
 
Alig confidence 












.......



























Template Conservation    

    
  

.......
 
 
   

       
     

   
Template Sequence  HGGMRCLAVSLIS. . . . . . . NVIASNCEEVLRAGEEASARMTALVKLV
Template Known Secondary structure  TT
.......

TT


Template Predicted Secondary structure 



.......





Template SS confidence 















































   227..230......... 240.........250.........260.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions