Job Description P09831 Confidence 66.14% Date Wed Jan 25 15:20:14 GMT 2012 Rank 178 Aligned Residues 72 % Identity 17% Template c3d82A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a cupin-2 domain containing protein (sfri_3543)2 from shewanella frigidimarina ncimb 400 at 2.05 a resolution Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	D	F	N	S	M	H	M	E	P	W	D	G	P	A	G	I	V	M	S	D	G	R	F	A	A	C	N	L	D	R	N	G	L	R	P	A	R	Y	V	I	T	K	D	K	L	I	T	C	A	S	E	V	G	I	W	D	Y	Q	P	D	E	V	V	E	K	G	R	V	G	P	G	E	L	M	V	I
Query Conservation
Alig confidence														.															.																																						.	.	.	.
Template Conservation														.															.																																						.	.	.	.
Template Sequence		F	N	D	K	F	S	L	F	N	Q	H	W	.	S	P	R	V	I	A	E	X	N	D	Y	Q	F	K	.	L	V	K	V	E	G	E	F	V	W	H	E	H	A	D	T	D	E	V	F	I	V	X	E	G	T	L	Q	I	A	F	R	D	Q	N	I	T	.	.	.	.	L	Q	A	G	E	X	Y	V	I
Template Known Secondary structure								T				S	S	.									T	T					.											B			T	T										S							S	S					.	.	.	.			T	T
Template Predicted Secondary structure														.															.																																						.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions