Job Description P09831 Confidence 99.84% Date Wed Jan 25 15:20:14 GMT 2012 Rank 16 Aligned Residues 283 % Identity 21% Template c2rduA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:hydroxyacid oxidase 1; PDBTitle: crystal structure of human glycolate oxidase in complex with2 glyoxylate Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		834	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.						.	.	.	860	.	.	.	.	.	.	.	.	.		870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.					.	.	.	900	.	.	.
Predicted Secondary structure																									.	.	.	.	.														.																												.	.	.	.
Query SS confidence																									.	.	.	.	.														.																												.	.	.	.
Query Sequence		L	A	I	T	P	G	E	N	A	V	N	I	A	D	V	E	P	A	S	E	L	F	K	.	.	.	.	.	R	F	D	T	A	A	M	S	I	G	A	L	S	.	P	E	A	H	E	A	L	A	E	A	M	N	S	I	G	G	N	S	N	S	G	E	G	G	E	D	P	.	.	.	.	A	R	Y	G	T	N	K
Query Conservation																									.	.	.	.	.														.																												.	.	.	.
Alig confidence							.																		.	.	.	.	.														.																												.	.	.	.
Template Conservation							.
Template Sequence		W	K	L	Y	P	.	R	M	L	R	N	V	A	E	T	D	L	S	T	S	V	L	G	Q	R	V	S	M	P	I	C	V	G	A	T	A	M	Q	R	M	A	H	V	D	G	E	L	A	T	V	R	A	C	Q	S	L	G	T	G	M	M	L	S	S	W	A	T	S	S	I	E	E	V	A	E	A	G	P	E	A
Template Known Secondary structure		S					.			S	S			T	T		B						T	T				S	S	S							S		G	G	G	T	S	T	T													T							T	T		S	S										T	T	S
Template Predicted Secondary structure							.
Template SS confidence
		47	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		904	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.			.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.		.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Predicted Secondary structure																														.	.																							.
Query SS confidence																														.	.																							.
Query Sequence		V	S	R	I	K	Q	V	A	S	G	R	F	G	V	T	P	A	Y	L	V	N	A	D	V	I	Q	I	K	.	.	V	A	Q	G	A	K	P	G	E	G	G	Q	L	P	G	D	K	V	T	P	Y	I	.	A	K	L	R	Y	S	V	P	G	V	T	L	I	S	P	P	P	H	H	D	I	Y	S	I	E	D	L
Query Conservation																														.	.																							.
Alig confidence																														.	.																							.
Template Conservation
Template Sequence		L	R	W	L	Q	L	Y	I	Y	K	D	R	E	V	T	K	K	L	V	R	Q	A	E	K	M	G	Y	K	A	I	F	V	T	V	D	T	P	Y	L	G	N	R	L	D	D	V	R	N	R	F	K	L	P	P	Q	L	R	M	K	N	F	E	T	S	T	L	S	F	S	P	E	E	N	F	G	D	D	S	G	L
Template Known Secondary structure										B	S	S														T	T									S		S	S											T					T	T				T	T		S	S	T	T	T	T	T		T	T	S				S	S
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		981														.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	I	F	D	L	K	Q	V	N	P	K	A	M	I	S	V	K	L	V	S	E	P	G	V	G	T	I	A	T	G	V	A	K	A	Y	A	D	L	I	T	I	A	G	Y	D	G	G	T	G	A	S	P	L	S	S	V	K	Y	A	G	C	P	W	E	L
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.														.							.	.	.																							.								.	.	.	.	.	.	.
Template Conservation																													.							.	.	.																							.								.	.	.	.	.	.	.
Template Sequence		A	A	Y	V	A	K	A	I	D	P	S	I	S	W	E	D	I	K	W	L	R	R	L	T	S	L	P	.	I	V	A	K	G	I	.	.	.	L	R	G	D	D	A	R	E	A	V	K	H	G	L	N	G	I	L	V	S	N	H	.	G	A	R	Q	L	D	G	.	.	.	.	.	.	.	V	P	A	T	I	D
Template Known Secondary structure									B		T	T															S		.							.	.	.		S										T	T									G	.	G	G	T	S	S	T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.							.	.	.																							.								.	.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.				.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.								.	.	270	.	.	.
		1048	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	V	E	T	Q	Q	A	L	V	A	N	G	L	R	H	K	I	R	L	Q	V	D	G	G	L	K	T	G	V	D	I	I	K	A	A	I	L	G	A	E	S	F	G	F	G	T	G	P	M	V	A	L	G	C	K	Y	L	R	I	C	H	L	N	N	C	A	T	G	V	A	T	Q	D	D	K	L	R	K	N
Query Conservation
Alig confidence											.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	P	E	I	V	E	A	V	.	.	.	.	.	E	G	K	V	E	V	F	L	D	G	G	V	R	K	G	T	D	V	L	K	A	L	A	L	G	A	K	A	V	F	V	G	R	P	I	V	W	G	L	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											.	.	.	.	.	T	T	S	S						S	S			S										T	T		S					S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.						.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		1128	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	H	G	L	P	F	K	V	T	N	Y	F	E	F	I	A	R	E	T	R	E	L	M	A	Q	L	G	V	T	R	L	V	D	L
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	Q	G	E	K	G	V	Q	D	V	L	E	I	L	K	E	E	F	R	L	A	M	A	L	S	G	C	Q	N	V	K	V	I
Template Known Secondary structure		.	.	.																									T		S	B	G	G	G
Template Predicted Secondary structure		.	.	.
Template SS confidence
					324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions