Job Description P09831 Confidence 99.85% Date Wed Jan 25 15:20:14 GMT 2012 Rank 13 Aligned Residues 342 % Identity 15% Template c2e77B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:lactate oxidase; PDBTitle: crystal structure of l-lactate oxidase with pyruvate complex Resolution 1.90 Å

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		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.				.	830	.	.	.	.	.	.	.	.		.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.											.																			.	.	.	.
Query SS confidence																																														.	.	.											.																			.	.	.	.
Query Sequence		K	Y	V	H	G	G	E	Y	H	A	Y	N	P	D	V	V	R	T	L	Q	Q	A	V	Q	S	G	E	Y	S	D	Y	Q	E	Y	A	K	L	V	N	E	R	P	A	T	.	.	.	T	L	R	D	L	L	A	I	T	P	.	G	E	N	A	V	N	I	A	D	V	E	P	A	S	E	L	F	K	.	.	.	.
Query Conservation																																														.	.	.											.																			.	.	.	.
Alig confidence																																														.	.	.											.																			.	.	.	.
Template Conservation
Template Sequence		E	Y	N	A	P	S	E	I	K	Y	I	D	V	V	N	T	Y	D	L	E	E	E	A	S	K	V	V	P	H	G	G	F	N	Y	I	A	G	A	S	G	D	E	W	T	K	R	A	N	D	R	A	W	K	H	K	L	L	Y	P	R	L	A	Q	D	V	E	A	P	D	T	S	T	E	I	L	G	H	K	I	K
Template Known Secondary structure															S		S	T								T	T	S												S	T	T	S									G	G	G	G								S					S		B						T	T				S
Template Predicted Secondary structure
Template SS confidence
		1007	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.
			857	.	.	860	.	.	.	.	.	.	.		.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.					.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930
Predicted Secondary structure		.												.																											.	.	.	.
Query SS confidence		.												.																											.	.	.	.
Query Sequence		.	R	F	D	T	A	A	M	S	I	G	A	.	L	S	P	E	A	H	E	A	L	A	E	A	M	N	S	I	G	G	N	S	N	S	G	E	G	G	.	.	.	.	E	D	P	A	R	Y	G	T	N	K	V	S	R	I	K	Q	V	A	S	G	R	F	G	V	T	P	A	Y	L	V	N	A	D	V	I	Q	I
Query Conservation		.												.																											.	.	.	.
Alig confidence		.												.																											.	.	.	.
Template Conservation
Template Sequence		A	P	F	I	M	A	P	I	A	A	H	G	L	A	H	T	T	K	E	A	G	T	A	R	A	V	S	E	F	G	T	I	M	S	I	S	A	Y	S	G	A	T	F	E	E	I	S	E	G	L	N	G	G	P	R	W	F	Q	I	Y	M	A	K	D	D	Q	Q	N	R	D	I	L	D	E	A	K	S	D	G	A
Template Known Secondary structure		S	S							S		G	G	G	T		T	T													T	S						T	T		S	S										T	T											S	S															T
Template Predicted Secondary structure
Template SS confidence
		1087	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.
		931											.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.
Query Sequence		K	.	.	.	.	.	.	.	.	.	.	V	A	Q	G	A	K	P	G	E	G	G	Q	L	P	G	D	K	V	T	P	Y	I	A	K	L	R	Y	S	V	P	G	V	T	L	I	S	P	P	P	H	H	D	I	Y	S	I	E	D	L	A	Q	L	I	F	D	L	K	Q	V	N	P	K	A	M	I	S	V	K	L
Query Conservation			.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.																																						.	.	.																								.
Template Conservation																																																		.	.	.																								.
Template Sequence		T	A	I	I	L	T	A	D	S	T	V	S	G	N	R	D	R	D	V	K	N	K	F	V	Y	P	F	G	M	P	I	V	Q	R	Y	L	R	G	T	A	E	G	M	S	L	N	N	I	.	.	.	Y	G	A	S	K	Q	K	I	S	P	R	D	I	E	E	I	A	G	H	S	G	L	P	.	V	F	V	K	G
Template Known Secondary structure		S							S		S	S										T	T				S	S			T	T	T	G	G	G	T	T	S		G	G	G							.	.	.				S		S																S		.
Template Predicted Secondary structure																																																		.	.	.																								.
Template SS confidence
		1167	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.				.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.		.	.	1240	.	.
		1001	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	E	P	G	V	G	T	I	A	T	G	V	A	K	A	Y	A	D	L	I	T	I	A	G	Y	D	G	G	T	G	A	S	P	L	S	S	V	K	Y	A	G	C	P	W	E	L	G	L	V	E	T	Q	Q	A	L	V	A	N	G	L	R	H	K	I	R	L	Q	V	D	G	G	L	K	T	G	V	D	I	I
Query Conservation
Alig confidence			.	.	.																							.								.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation			.	.	.																							.								.	.	.	.	.	.	.																.	.	.	.	.
Template Sequence		I	.	.	.	Q	H	P	E	D	A	D	M	A	I	K	R	G	A	S	G	I	W	V	S	N	H	.	G	A	R	Q	L	Y	E	.	.	.	.	.	.	.	A	P	G	S	F	D	T	L	P	A	I	A	E	R	V	.	.	.	.	.	N	K	R	V	P	I	V	F	D	S	G	V	R	R	G	E	H	V	A
Template Known Secondary structure			.	.	.		S										T	T		S							G	.	G	G	T	S	S	S	S	.	.	.	.	.	.	.																.	.	.	.	.	T	T	S	S						S	S			S
Template Predicted Secondary structure			.	.	.																							.								.	.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
		1243				.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.		.	.	.	.	1270	.	.								.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.						.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.
		1081	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	I	L	G	A	E	S	F	G	F	G	T	G	P	M	V	A	L	G	C	K	Y	L	R	I	C	H	L	N	N	C	A	T	G	V	A	T	Q	D	D	K	L	R	K	N	H	Y	H	G	L	P	F	K	V	T	N	Y	F	E	F	I	A	R	E	T	R	E	L	M	A	Q	L	G	V	T	R	L	V
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	L	A	S	G	A	D	V	V	A	L	G	R	P	V	L	F	G	L	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	W	Q	G	A	Y	S	V	L	D	Y	F	Q	K	D	L	T	R	V	M	Q	L	T	G	S	Q	N	V	E
Template Known Secondary structure						T	T		S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									T		S	B
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1307	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.																													.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.
		1161	.	.	.	.	.	.	.	.	1170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	I	G	R	T	D	L	L	K	E	L	D	G	F
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		D	L	.	K	G	L	D	L	F	D	N	P	Y	G	Y
Template Known Secondary structure				.	T	T								S		S
Template Predicted Secondary structure				.
Template SS confidence
		1359	1360		.	.	.	.	.	.	.	.	.	1370	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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