Return to main results Retrieve Phyre Job Id

Job DescriptionP09831
Confidence92.10%DateWed Jan 25 15:20:14 GMT 2012
Rank114Aligned Residues75
% Identity21%Templatec2a4aB_
PDB info PDB header:lyaseChain: B: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: deoxyribose-phosphate aldolase from p. yoelii
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1016...1020.........1030.........1040.........1050.........1060.. .......1070.........1080..... ....1090
Predicted Secondary structure 



















..





...


Query SS confidence 














































. .






















. . .




Query Sequence  AYADLITIAGYDGGTGASPLSSVKYAGCPWELGLVETQQALVANGLR. . HKIRLQVDGGLKTGVDIIKAAIL. . . GAESF
Query Conservation 
 

 
 


 






   
 
  
 
 
 

 
    
   


..  
 
  


  
  

  
  
...

   
Alig confidence 






















.........














..






















...




Template Conservation 











   


   
 ......... 
   
          
  










   
   
 
  


 

Template Sequence  GNADFIKTSTGKVQINATPSSVE. . . . . . . . . YIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILLARRFLFRI
Template Known Secondary structure  TT
S


S
SS



.........
GGGTTT
SS

S

Template Predicted Secondary structure 













.........















Template SS confidence 















































































   165....170.........180....... ..190.........200.........210.........220.........230.....
 
   1091........
Predicted Secondary structure 
Query SS confidence 








Query Sequence  GFGTGPMVA
Query Conservation    

  


Alig confidence 








Template Conservation 



   
 
Template Sequence  GSSSLVIKL
Template Known Secondary structure  SS
Template Predicted Secondary structure 
Template SS confidence 








   245....250...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions