Job Description P09831 Confidence 22.37% Date Wed Jan 25 15:20:14 GMT 2012 Rank 360 Aligned Residues 98 % Identity 12% Template c1qyuA_ PDB info PDB header:lyase Chain: A: PDB Molecule:ribosomal large subunit pseudouridine synthase d; PDBTitle: structure of the catalytic domain of 23s rrna pseudouridine2 synthase rlud Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		232	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		F	R	Y	L	A	H	N	G	.	.	.	.	.	E	I	N	T	I	T	G	N	R	Q	W	A	R	A	R	T	Y	K	F	Q	T	P	L	I	P	D	L	H	D	A	A	P	F	V	N	E	T	G	S	D	S	S	S	M	D	N	M	L	E	L	L	L	A	G	G	M	D	I	I	R	A	M	R	L	L	V	P
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.																															.	.	.	.
Template Conservation																																													.	.	.	.
Template Sequence		Y	R	I	X	E	H	F	R	V	H	T	R	L	R	L	R	L	E	T	G	R	T	H	Q	I	R	V	H	X	A	H	I	T	H	P	L	V	G	D	P	V	Y	G	.	.	.	.	G	R	P	R	P	P	K	G	A	S	E	A	F	I	S	T	L	R	K	F	D	R	Q	A	L	H	A	T	X	L	R	L	Y
Template Known Secondary structure									S	S									S				T	T									T	T			B	T	T		T	T	T	T	.	.	.	.							T	T														S
Template Predicted Secondary structure																																													.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.					.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.						.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		P	A	W	Q	N	N	P	D	.	.	.	.	.	M	D	P	E	L	R	A	F	F	D	F	N	S	M	H	M	E	P	W
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.
Template Conservation
Template Sequence		H	P	I	S	G	I	E	X	E	W	H	A	P	I	P	Q	D	X	V	E	L	I	E	V	X	R	A	D	F	E	E	H
Template Known Secondary structure			T	T	T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions