Job Description P09831 Confidence 95.54% Date Wed Jan 25 15:20:14 GMT 2012 Rank 89 Aligned Residues 163 % Identity 21% Template c1q15A_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:cara; PDBTitle: carbapenam synthetase Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.					.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.
Query SS confidence																																																			.	.	.	.
Query Sequence		N	I	Y	K	G	L	C	M	P	T	D	L	P	R	F	Y	L	D	L	A	D	L	R	L	E	S	A	I	C	L	F	H	Q	R	F	S	T	N	T	V	P	R	W	P	L	A	Q	P	F	.	.	.	.	R	Y	L	A	H	N	G	E	I	N	T	I	T	G	N	R	Q	W	A	R	A	R	T	Y	K	F	Q
Query Conservation																																																			.	.	.	.
Alig confidence																					.	.	.	.	.	.																.	.	.							.	.	.	.																											.
Template Conservation																					.	.	.	.	.	.																.	.	.																																					.
Template Sequence		V	V	Y	K	G	S	D	T	D	I	N	N	I	Q	R	D	F	D	G	.	.	.	.	.	.	K	G	E	A	L	S	N	G	Y	L	F	I	E	Q	N	.	.	.	G	H	Y	Q	K	C	E	M	E	R	G	T	A	Y	L	I	G	S	L	Y	N	R	T	F	L	I	G	L	A	G	V	W	E	G	E	A	.
Template Known Secondary structure					T											T	T	S			.	.	.	.	.	.						T	T							T	T	.	.	.									S	S	S									S										T	T	T		G	G	G	.
Template Predicted Secondary structure																					.	.	.	.	.	.																.	.	.																																					.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.							.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	L	I	P	D	L	H	D	A	A	P	F	V	N	E	T	G	S	D	S	S	S	M	D	N	M	L	E	L	L	L	A	G	G	M	D	I	I	R	A	M	R	L	L	V	P	P	A	W	Q	N	N	P	D	M	D	P	E	L	R	A	F	F	D	F	N	S	M	H	M	E	P	W	D	G	P	A	G	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	A	N	D	A	.	.	.	.	.	.	.	E	L	L	A	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	R	L	G	A	N	A	L	A	L	A	E	G	D	F	C	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G					.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G	G	G	G			S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	77	.	.	80	.	.								.	.	.	.	.	.																													.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.																								.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure						.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	M	S	D	.	G	R	F	A	A	C	N	L	D	R	N	G	L	R	P	A	R	Y	V	I	T	K	D	K	L	I	T	C	A	S	E	V	G	I	W	D	Y	Q	P	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	E	K	G	R	V	G	P	G	E
Query Conservation						.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																	.			.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.			.
Template Sequence		F	I	D	E	P	N	G	E	L	T	V	I	T	E	S	R	G	F	S	P	V	.	H	V	.	V	Q	G	K	K	A	W	M	T	N	S	L	K	L	V	T	A	A	E	G	E	G	A	L	W	F	E	E	E	A	L	V	C	Q	S	L	M	R	A	D	T	Y	T	P	V	K	N	A	Q	R	L	K	P	G	A
Template Known Secondary structure						T	T	S								S	S	S	S	S			.			.			S	S	S					S											T	T	S	S		B							T	T		S				T	T			S	B	T	T						S	S
Template Predicted Secondary structure																							.			.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	V	I	D	T	R	S	G	R	I	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	V	L	T	H	D	S	E	G	Y	S	F
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions