Job Description P09831 Confidence 100.00% Date Wed Jan 25 15:20:14 GMT 2012 Rank 2 Aligned Residues 1421 % Identity 47% Template c1lm1A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ferredoxin-dependent glutamate synthase; PDBTitle: structural studies on the synchronization of catalytic centers in2 glutamate synthase: native enzyme Resolution 2.80 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		C	G	F	G	L	I	A	H	I	E	G	E	P	S	H	K	V	V	R	T	A	I	H	A	L	A	R	M	Q	H	R	G	A	I	L	A	D	G	K	T	G	D	G	C	G	L	L	L	Q	K	P	D	R	F	F	R	I	V	A	Q	E	R	G	W	R	L	A	K	.	.	N	Y	A	V	G	M	L	F	L	N
Query Conservation																																																																						.	.
Alig confidence																																																																						.	.
Template Conservation
Template Sequence		C	G	V	G	F	I	A	N	L	R	G	K	P	D	H	T	L	V	E	Q	A	L	K	A	L	G	C	M	E	H	R	G	G	C	S	A	D	N	D	S	G	D	G	A	G	V	M	T	A	I	P	R	E	L	L	A	Q	W	F	N	T	R	N	L	P	M	P	D	G	D	R	L	G	V	G	M	V	F	L	P
Template Known Secondary structure										S	S	S			B														T	G	G	G	S		B		T	T	S	S	S	B	S										T	T	T									T						G	G	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	P	E	L	A	A	A	A	R	R	I	V	E	E	E	L	Q	R	E	T	L	S	I	V	G	W	R	D	V	P	T	N	E	G	V	L	G	E	I	A	L	S	S	L	P	R	I	E	Q	I	F	V	N	A	P	A	G	W	R	P	R	D	M	E	R	R	L	F	I	A	R	R	R	I	E	K	R	L	E
Query Conservation
Alig confidence																																																																																	.
Template Conservation																																																																																	.
Template Sequence		Q	E	P	S	A	R	E	V	A	R	A	Y	V	E	E	V	V	R	L	E	K	L	T	V	L	G	W	R	E	V	P	V	N	S	D	V	L	G	I	Q	A	K	N	N	Q	P	H	I	E	Q	I	L	V	T	C	P	E	G	C	A	G	D	E	L	D	R	R	L	Y	I	A	R	S	I	I	G	K	K	L	.
Template Known Secondary structure		S	S																		T	T											B		G	G	G	S						T	T												T	T																					T		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	K	D	F	Y	V	C	S	L	S	N	L	V	N	I	Y	K	G	L	C	M	P	T	D	L	P	R	F	Y	L	D	L	A	D	L	R	L	E	S	A	I	C	L	F	H	Q	R	F	S	T	N	T	V	P	R	W	P	L	A	Q	P	F	R	Y	L	A	H	N	G	E	I	N	T	I	T	G	N	R	Q
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	A	E	D	F	Y	V	C	S	F	S	C	R	T	I	V	Y	K	G	M	V	R	S	I	I	L	G	E	F	Y	L	D	L	K	N	P	G	Y	T	S	N	F	A	V	Y	H	R	R	F	S	T	N	T	M	P	K	W	P	L	A	Q	P	M	R	L	L	G	H	N	G	E	I	N	T	L	L	G	N	I	N
Template Known Secondary structure		.	B	T	T	B							S	S							S			G	G	G					B	S	G	G	G	S	T	T			B	S										S	S	S				G	G	G	S	S			S	S								S	S
Template Predicted Secondary structure		.
Template SS confidence
			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.
Predicted Secondary structure																	.	.																																																					.	.
Query SS confidence																	.	.																																																					.	.
Query Sequence		W	A	R	A	R	T	Y	K	F	Q	T	P	L	I	P	.	.	D	L	H	D	A	A	P	F	V	N	E	T	G	S	D	S	S	S	M	D	N	M	L	E	L	L	L	A	G	G	M	D	I	I	R	A	M	R	L	L	V	P	P	A	W	Q	N	N	P	D	M	D	.	.	P	E	L	R	A	F	F	D	F
Query Conservation																	.	.																																																					.	.
Alig confidence																	.	.																																																					.	.
Template Conservation
Template Sequence		W	M	A	A	R	E	K	E	L	E	V	S	G	W	T	K	A	E	L	E	A	L	T	P	I	V	N	Q	A	N	S	D	S	Y	N	L	D	S	A	L	E	L	L	V	R	T	G	R	S	P	L	E	A	A	M	I	L	V	P	E	A	Y	K	N	Q	P	A	L	K	D	Y	P	E	I	S	D	F	H	D	Y
Template Known Secondary structure							G	G	G				S	S							G	G	G						T	T	S																T	T											S					S	S		G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	M	H	M	E	P	W	D	G	P	A	G	I	V	M	S	D	G	R	F	A	A	C	N	L	D	R	N	G	L	R	P	A	R	Y	V	I	T	K	D	K	L	I	T	C	A	S	E	V	G	I	W	D	Y	Q	P	D	E	V	V	E	K	G	R	V	G	P	G	E	L	M	V	I	D	T	R	S	G	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	S	G	L	Q	E	P	W	D	G	P	A	L	L	V	F	S	D	G	K	I	V	G	A	G	L	D	R	N	G	L	R	P	A	R	Y	C	I	T	K	D	D	Y	I	V	L	G	S	E	A	G	V	V	D	L	P	E	V	D	I	V	E	K	G	R	L	A	P	G	Q	M	I	A	V	D	L	A	E	Q	K
Template Known Secondary structure											S									S	S								S	S			S								T	T							S	S	S	T	T	S				G	G	G									T	T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	H	S	A	E	T	D	D	D	L	K	S	R	H	P	Y	K	E	W	M	E	K	N	V	R	R	L	V	P	F	E	D	L	P	D	E	E	V	G	S	R	E	L	D	D	D	T	L	A	S	Y	Q	K	Q	F	N	Y	S	A	E	E	L	D	S	V	I	R	V	L	G	E	N	G	Q	E	A	V	G	S
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	K	N	Y	Q	I	K	Q	Q	A	A	Q	K	Y	P	Y	G	E	W	I	K	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	Q	T	V	L	Q	Q	Q	A	A	F	G	Y	T	A	E	D	V	E	M	V	V	V	P	M	A	S	Q	G	K	E	P	T	F	C
Template Known Secondary structure				S										S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S									T	T								T	T								S	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.																					.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	D	D	T	P	F	A	V	L	S	S	Q	P	R	I	I	Y	D	Y	F	R	Q	Q	F	A	Q	V	T	N	P	P	I	D	P	L	R	E	A	H	V	M	S	L	A	T	S	I	G	R	E	M	N	V	F	C	E	A	E	G	Q	A	H	R	L	S	F	K	S	P	I	L	L	Y	S	D	F	K	Q	L
Query Conservation
Alig confidence																																																															.	.	.	.	.
Template Conservation																																																															.	.	.	.	.
Template Sequence		M	G	D	D	T	P	L	A	V	L	S	H	K	P	R	L	L	Y	D	Y	F	K	Q	R	F	A	Q	V	T	N	P	P	I	D	P	L	R	E	N	L	V	M	S	L	A	M	F	L	G	K	R	G	N	L	L	E	P	K	A	E	K	.	.	.	.	.	L	R	S	P	L	V	N	E	V	E	L	Q	A	I
Template Known Secondary structure		S				S			T	T	T		S	S				G	G	G	G								S	S	S					T	T	T	T	G	G	G		B			B			S					S	S	S						.	.	.	.	.	B	S	S	S	B
Template Predicted Secondary structure																																																															.	.	.	.	.
Template SS confidence
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.						.	.	.	.	540	.	.	.	.	.	.	.	.	.
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.		.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.					.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
Predicted Secondary structure																						.																																	.	.	.	.
Query SS confidence																						.																																	.	.	.	.
Query Sequence		T	T	M	K	E	E	H	Y	R	A	D	T	L	D	I	T	F	D	V	T	.	K	T	T	L	E	A	T	V	K	E	L	C	D	K	A	E	K	M	V	R	S	G	T	V	L	L	V	L	S	D	R	N	.	.	.	.	I	A	K	D	R	L	P	V	P	A	P	M	A	V	G	A	I	Q	T	R	L	V	D
Query Conservation																						.																																	.	.	.	.
Alig confidence				.	.	.																.																																	.	.	.	.
Template Conservation				.	.	.
Template Sequence		K	T	.	.	.	G	Q	L	Q	V	A	E	V	S	T	L	Y	D	L	D	G	V	N	S	L	E	D	A	L	T	N	L	V	K	T	A	I	A	T	V	Q	A	G	A	E	I	L	V	L	T	D	R	P	N	G	A	I	L	T	E	N	Q	S	F	I	P	P	L	L	A	V	G	A	V	H	H	H	L	I	R
Template Known Secondary structure				.	.	.	S	S	S							S	B			S	S	S	S																				T	T		S						S	S	G	G	G				T	T	T	T		B
Template Predicted Secondary structure				.	.	.
Template SS confidence
		555	.				.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.
		641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.											690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	S	L	R	C	D	A	N	I	I	V	E	T	A	S	A	R	D	P	H	H	F	A	V	L	L	G	F	G	A	T	A	I	Y	P	Y	L	A	Y	E	T	L	G	R	L	V	D	T	H	.	.	.	.	.	.	.	.	.	.	A	I	A	K	D	Y	R	T	V	M	L	N	Y	R	N	G	I	N	K	G	L
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	L	R	L	K	A	S	L	I	V	D	T	A	Q	C	W	S	T	H	H	F	A	C	L	V	G	Y	G	A	S	A	I	C	P	Y	L	A	L	E	S	V	R	Q	W	W	L	D	E	K	T	Q	K	L	M	E	N	G	R	L	D	R	I	D	L	P	T	A	L	K	N	Y	R	Q	S	V	E	A	G	L
Template Known Secondary structure			T		G	G	G								S	S			S										T	T		S																S	S									S	S	S
Template Predicted Secondary structure
Template SS confidence
		632	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.
		711	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.		.	.	780	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		Y	K	I	M	S	K	M	G	I	S	T	I	A	S	Y	R	C	S	K	L	F	E	A	V	G	L	H	D	D	V	V	G	L	C	F	Q	G	A	V	S	R	I	G	G	A	S	F	E	D	F	Q	Q	D	L	L	N	L	S	K	R	A	W	L	A	R	K	P	.	I	S	Q	G	G	L	L	K	Y	V	H	G
Query Conservation																																																																					.
Alig confidence																																																																					.
Template Conservation
Template Sequence		F	K	I	L	S	K	M	G	I	S	L	L	A	S	Y	H	G	A	Q	I	F	E	A	I	G	L	G	A	E	L	V	E	Y	A	F	A	G	T	T	S	R	V	G	G	L	T	I	A	D	V	A	G	E	V	M	V	F	H	G	M	A	F	P	E	M	A	K	K	L	E	N	F	G	F	V	N	Y	R	P	G
Template Known Secondary structure							T	T	T			B							S						S	S	B									S	T	T				S	S			B														G	G	G	T	T	S			S	S						S	S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		712	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.
		790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	Y	H	A	Y	N	P	D	V	V	R	T	L	Q	Q	A	V	Q	S	G	E	Y	S	D	Y	Q	E	Y	A	K	L	V	N	E	R	P	A	T	T	L	R	D	L	L	A	I	T	P	G	E	N	A	V	N	I	A	D	V	E	P	A	S	E	L	F	K	R	F	D	T	A	A	M	S	I	G	A	L	S
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		G	E	Y	H	M	N	S	P	E	M	S	K	S	L	H	K	A	V	A	.	A	Y	Y	D	H	Y	E	L	Y	R	Q	Y	L	K	D	R	P	V	T	A	L	R	D	L	L	D	F	N	A	D	Q	P	A	I	S	L	E	E	V	E	S	V	E	S	I	V	K	R	F	C	T	G	G	M	S	L	G	A	L	S
Template Known Secondary structure		S				S															.																		S		S	G	G	G	G						S	S					T	T	T	S								T	T								T	T	T	S
Template Predicted Secondary structure																					.
Template SS confidence
		792	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810		.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870
		870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.																								900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	A	H	E	A	L	A	E	A	M	N	S	I	G	G	N	S	N	S	G	E	G	G	E	D	P	A	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	N	K	V	S	R	I	K	Q	V	A	S	G	R	F	G	V	T	P	A	Y	L	V	N	A	D
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	A	H	E	T	L	A	I	A	M	N	R	L	G	A	K	S	N	S	G	E	G	G	E	D	V	V	R	Y	L	T	L	D	D	V	D	S	E	G	N	S	P	T	L	P	H	L	H	G	L	Q	N	G	D	T	A	N	S	A	I	K	Q	I	A	S	G	R	F	G	V	T	P	E	Y	L	M	S	G	K
Template Known Secondary structure															T	T		B		B		T	T	S				G	G	G	G	S							T	T	S			T	T	S	T	T			S			T	T						S						T	T		T	T								T		S
Template Predicted Secondary structure
Template SS confidence
		882	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.
		927	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	Q	I	K	V	A	Q	G	A	K	P	G	E	G	G	Q	L	P	G	D	K	V	T	P	Y	I	A	K	L	R	Y	S	V	P	G	V	T	L	I	S	P	P	P	H	H	D	I	Y	S	I	E	D	L	A	Q	L	I	F	D	L	K	Q	V	N	P	K	A	M	I	S	V	K	L	V	S	E	P	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	E	I	K	M	A	Q	G	A	K	P	G	E	G	G	Q	L	P	G	K	K	V	S	E	Y	I	A	M	L	R	R	S	K	P	G	V	T	L	I	S	P	P	P	H	H	D	I	Y	S	I	E	D	L	A	Q	L	I	Y	D	L	H	Q	I	N	P	E	A	Q	V	S	V	K	L	V	A	E	I	G	I
Template Known Secondary structure										T	T		T	T	S						G	G	G										T	S		T	T							S	S		T	T		S	S																T	T	S										T	T
Template Predicted Secondary structure
Template SS confidence
		962	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.
		1007	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	I	A	T	G	V	A	K	A	Y	A	D	L	I	T	I	A	G	Y	D	G	G	T	G	A	S	P	L	S	S	V	K	Y	A	G	C	P	W	E	L	G	L	V	E	T	Q	Q	A	L	V	A	N	G	L	R	H	K	I	R	L	Q	V	D	G	G	L	K	T	G	V	D	I	I	K	A	A	I	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	I	A	A	G	V	A	K	A	N	A	D	I	I	Q	I	S	G	H	D	G	G	T	G	A	S	P	L	S	S	I	K	H	A	G	S	P	W	E	L	G	V	T	E	V	H	R	V	L	M	E	N	Q	L	R	D	R	V	L	L	R	A	D	G	G	L	K	T	G	W	D	V	V	M	A	A	L	M	G
Template Known Secondary structure											T	T		S							T	T				S	S									B																		T	T		G	G	G							S	S			S											T
Template Predicted Secondary structure
Template SS confidence
		1042	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.
		1087	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	S	F	G	F	G	T	G	P	M	V	A	L	G	C	K	Y	L	R	I	C	H	L	N	N	C	A	T	G	V	A	T	Q	D	D	K	L	R	K	N	H	Y	H	G	L	P	F	K	V	T	N	Y	F	E	F	I	A	R	E	T	R	E	L	M	A	Q	L	G	V	T	R	L	V	D	L	I	G	R	T
Query Conservation
Alig confidence																																											.
Template Conservation																																											.
Template Sequence		A	E	E	Y	G	F	G	S	I	A	M	I	A	E	G	C	I	M	A	R	V	C	H	T	N	N	C	P	V	G	V	A	T	Q	Q	E	R	L	R	Q	R	.	F	K	G	V	P	G	Q	V	V	N	F	F	Y	F	I	A	E	E	V	R	S	L	L	A	H	L	G	Y	R	S	L	D	D	I	I	G	R	T
Template Known Secondary structure			S					S							T	T							G	G	G	T			T	T	S	S	S								T	T	.																											T		S		G	G	G	T	T	T		G
Template Predicted Secondary structure																																											.
Template SS confidence
		1122	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.		.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200
		1167	.	.	1170	.	.	.	.	.		.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.			.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.
Predicted Secondary structure											.																																															.	.
Query SS confidence											.																																															.	.
Query Sequence		D	L	L	K	E	L	D	G	F	.	T	A	K	Q	Q	K	L	A	L	S	K	L	L	E	T	A	E	P	H	P	G	K	A	L	Y	C	T	E	N	N	P	P	F	D	N	G	L	L	N	A	Q	L	L	Q	Q	A	.	.	K	P	F	V	D	E	R	Q	S	K	T	F	W	F	D	I	R	N	T	D	R	S
Query Conservation											.																																															.	.
Alig confidence											.																					.																										.	.
Template Conservation																																.
Template Sequence		D	L	L	K	V	R	S	D	V	Q	L	S	K	T	Q	N	L	T	L	D	C	L	L	N	L	P	D	T	K	Q	.	N	R	Q	W	L	N	H	E	P	V	H	S	N	G	P	V	L	D	D	D	I	L	A	D	P	D	I	Q	E	A	I	N	H	Q	T	T	A	T	K	T	Y	R	L	V	N	T	D	R	T
Template Known Secondary structure		G	G					S	S				S	S		S														S	S	.			G	G	G				S	S					S							T	T	S	T							S	S	S											T	T			S
Template Predicted Secondary structure																																.
Template SS confidence
		1201	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230		.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.
		1244	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	A	S	L	S	G	Y	I	A	Q	T	H	G	D	Q	G	L	A	A	D	P	I	K	A	Y	F	N	G	T	A	G	Q	S	F	G	V	W	N	A	G	G	V	E	L	Y	L	T	G	D	A	N	D	Y	V	G	K	G	M	A	G	G	L	I	A	I	R	P	P	V	G	S	A	F	R	S	H	E	A	S
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		V	G	T	R	L	S	G	A	I	A	K	K	Y	G	N	N	G	F	E	.	G	N	I	T	L	N	F	Q	G	A	A	G	Q	S	F	G	A	F	N	L	D	G	M	T	L	H	L	Q	G	E	A	N	D	Y	V	G	K	G	M	N	G	G	E	I	V	I	V	P	H	P	Q	A	S	F	A	P	E	D	N	V
Template Known Secondary structure		T	T												T	T	T				.													T	T	T	T	T	T			T	T											T	T	T	T	T	T												T	T			S		G	G	G	S	B
Template Predicted Secondary structure																					.
Template SS confidence
		1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.		.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.
		1324	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	G	N	T	C	L	Y	G	A	T	G	G	R	L	Y	A	A	G	R	A	G	E	R	F	G	V	R	N	S	G	A	I	T	V	V	E	G	I	G	D	N	G	C	E	Y	M	T	G	G	I	V	C	I	L	G	K	T	G	V	N	F	G	A	G	M	T	G	G	F	A	Y	V	L	D	E	S	G	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	G	N	T	C	L	Y	G	A	T	G	G	N	L	Y	A	N	G	R	A	G	E	R	F	A	V	R	N	S	V	G	K	A	V	I	E	G	A	G	D	H	C	C	E	Y	M	T	G	G	V	I	V	V	L	G	P	V	G	R	N	V	G	A	G	M	T	G	G	L	A	Y	F	L	D	E	V	G	D	L
Template Known Secondary structure			S		S	S	T	T	T	T														S	S	T	T	T	T		S	S								B		S	S	T	T	T	T										S		B		S		T	T	T	T											T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1359	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.
		1404	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	R	V	N	P	E	L	V	E	V	L	S	V	D	A	L	A	I	H	E	E	H	L	R	G	L	I	T	E	H	V	Q	H	T	G	S	Q	R	G	E	E	I	L	A	N	W	S	T	F	A	T	K	F	A	L	V	K	P	K	S	S	D	V	K	A
Query Conservation
Alig confidence																	.																																													.	.
Template Conservation																	.																																													.	.
Template Sequence		P	E	K	I	N	P	E	I	I	T	L	Q	R	I	T	.	A	S	K	G	E	E	Q	L	K	S	L	I	T	A	H	V	E	H	T	G	S	P	K	G	K	A	I	L	A	N	W	S	D	Y	L	G	K	F	W	Q	A	V	P	P	.	.	S	E	K	D
Template Known Secondary structure					S		T	T	T								.	S																		S											T	T	T	T	T	T	S	S							T	.	.	T	T	T	T
Template Predicted Secondary structure																	.																																													.	.
Template SS confidence
		1439	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.		.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.			.	.	1500	.