Job Description P09831 Confidence 99.45% Date Wed Jan 25 15:20:14 GMT 2012 Rank 41 Aligned Residues 300 % Identity 20% Template c1jcnA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:inosine monophosphate dehydrogenase i; PDBTitle: binary complex of human type-i inosine monophosphate dehydrogenase2 with 6-cl-imp Resolution 2.50 Å

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		820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.		.						.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.
Predicted Secondary structure																																						.		.	.	.	.	.
Query SS confidence																																						.		.	.	.	.	.
Query Sequence		K	L	V	N	E	R	P	A	T	T	L	R	D	L	L	A	I	T	P	G	E	N	A	V	N	I	A	D	V	E	P	A	S	E	L	F	.	K	.	.	.	.	.	R	F	D	T	A	A	M	S	I	G	A	L	S	P	E	A	H	E	A	L	A	E	A	M	N	S	I	G	G	N	S	N	S	G	E	G	G
Query Conservation																																						.		.	.	.	.	.
Alig confidence																.																						.		.	.	.	.	.									.							.	.	.	.																.
Template Conservation																.																																					.							.	.	.	.																.
Template Sequence		Q	L	F	A	S	A	D	D	L	T	Y	N	D	F	.	L	I	L	P	G	F	I	D	F	I	A	D	E	V	D	L	T	S	A	L	T	R	K	I	T	L	K	T	P	L	I	S	S	P	M	D	.	T	V	T	E	A	D	.	.	.	.	M	A	I	A	M	A	L	M	G	G	I	G	F	I	H	.	H	N
Template Known Secondary structure				T	T	S	S	S				G	G	G		.									S		G	G	G		B					S	S	S	S				S	S								T	.	T	T		S			.	.	.	.								T	T							.		S
Template Predicted Secondary structure																.																																					.							.	.	.	.																.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.
		894	.	.	.	.	.				900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.																																																																					.	.	.
Query SS confidence								.	.	.																																																																					.	.	.
Query Sequence		E	D	P	A	R	Y	.	.	.	G	T	N	K	V	S	R	I	K	Q	V	A	S	G	R	F	G	V	T	P	A	Y	L	V	N	A	D	V	I	Q	I	K	V	A	Q	G	A	K	P	G	E	G	G	Q	L	P	G	D	K	V	T	P	Y	I	A	K	L	R	Y	S	V	P	G	V	T	L	I	S	.	.	.
Query Conservation								.	.	.																																																																					.	.	.
Alig confidence								.	.	.																																																																					.	.	.
Template Conservation
Template Sequence		C	T	P	E	F	Q	A	N	E	V	R	K	V	K	N	F	E	Q	G	F	I	T	D	P	V	V	L	S	P	G	I	P	I	T	E	V	G	I	V	T	S	R	D	I	D	P	R	I	E	L	V	V	A	P	A	G	V	T	L	K	E	A	N	E	I	L	Q	R	S	K	K	G	K	L	P	I	V	N	D	C
Template Known Secondary structure		S														T			T	T	S		S	S										S								T	T	T	T				B							T	T			S	T	T	T	T	T						T		S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
																																	968	.	970	.	.	.	.	.	.	.	.	.	980	.	.																					.	.	.	.	.	.	.	990	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	P	H	H	D	I	Y	S	I	E	D	L	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	F	D	L	K	Q	V	N	P	K	A	M	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	L	V	R	T	D	L	K	K	N	R	D	Y	P	L	A	S	K	D	S	Q	K	Q	L	L	C	G	A	A	V	G	T	R	E	D	D	K	Y	R	L	D	L	L	T	Q	A	G	V	D	V	I	V	L	D	S	S	Q	G	N	S	V	Y	Q	I	A	M	V	H	Y	I	K	Q	K	Y	P	H	L	Q	V
Template Known Secondary structure		S								S	S					T	T			B		T	T	S		B								S	S	T	T											T	T		S							S				S															T	T
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		997	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	K	L	V	S	E	P	G	V	G	T	I	A	T	G	V	A	K	A	Y	A	D	L	I	T	I	A	G	Y	D	G	G	T	G	A	S	P	L	S	S	V	K	Y	A	G	C	P	W	E	L	G	L	V	E	T	Q	Q	A	L	V	A	N	G	L	R	H	K	I	R	L	Q	V	D	G	G	L	K	T	G
Query Conservation
Alig confidence																	.	.	.																										.	.																	.	.	.	.
Template Conservation																	.	.	.																										.	.																	.	.	.	.
Template Sequence		I	G	G	N	V	V	T	A	A	Q	A	K	N	L	I	.	.	.	D	A	G	V	D	G	L	R	V	G	M	G	C	G	S	I	C	I	T	Q	E	V	M	A	C	.	.	G	R	P	Q	G	T	A	V	Y	K	V	A	E	Y	A	R	.	.	.	.	R	F	G	V	P	I	I	A	D	G	G	I	Q	T	V
Template Known Secondary structure								S									.	.	.			T		S						S	S		S			B	T	T	B				S		.	.																G	.	.	.	.	G	G	T							S				S
Template Predicted Secondary structure																	.	.	.																										.	.																	.	.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.			340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.					.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		1077	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	I	I	K	A	A	I	L	G	A	E	S	F	G	F	G	T	G	P	M	V	A	L	G	C	K	Y	L	R	I	C	H	L	N	N	C	A	T	G	V	A	T	Q	D	D	K	L	R	K	N	H	Y	H	G	L	P	F	K	V	T	N	Y	F	E	F	I	A	R	E	T	R	E	L	M	A	Q	L	G	V
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	H	V	V	K	A	L	A	L	G	A	S	T	V	M	M	G	S	L	L	A	A	T	T	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	E	K	G	S	I	Q	K	F	V	P	Y	L	I	A	G	I	Q	H	G	C	Q	D	I	G	A
Template Known Secondary structure										T	T		S					S	T	T	T	T	T	S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																									T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.																												.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		1157	.	.	1160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	L	V	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	L	S	V	L
Template Known Secondary structure		S	B
Template Predicted Secondary structure
Template SS confidence
		474	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions