Job Description P09831 Confidence 96.86% Date Wed Jan 25 15:20:14 GMT 2012 Rank 69 Aligned Residues 116 % Identity 16% Template c1gthD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:dihydropyrimidine dehydrogenase; PDBTitle: dihydropyrimidine dehydrogenase (dpd) from pig, ternary2 complex with nadph and 5-iodouracil Resolution 2.25 Å

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		978	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.		.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.															1040	.	.
Predicted Secondary structure																												.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	D	L	A	Q	L	I	F	D	L	K	Q	V	N	P	K	A	M	I	S	V	K	L	V	S	E	.	P	G	V	G	T	I	A	T	G	V	A	K	A	Y	A	D	L	I	T	I	A	G	Y	D	G	G	T	G	A	S	P	L	S	S	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	G
Query Conservation																												.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.									.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		E	L	V	R	N	I	C	R	W	V	R	Q	A	V	Q	I	P	.	F	F	A	K	L	T	P	N	V	T	D	I	V	S	I	A	R	A	A	K	E	G	G	A	D	G	V	T	A	T	N	T	V	S	G	L	M	G	L	K	A	D	G	T	P	W	P	A	V	G	A	G	K	R	T	T	Y	G	G	V	S	G
Template Known Secondary structure																S	S		.							S		S	S													T		S														B		T	T	S		B	S	S		B	T	T	T	T	B								S
Template Predicted Secondary structure																			.
Template SS confidence
		689	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.		.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.
		1043	.	.	.		.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		C	P	W	E	.	L	G	L	V	E	T	Q	Q	A	L	V	A	N	G	L	R	H	K	I	R	L	Q	V	D	G	G	L	K	T	G	V	D	I	I	K	A	A	I	L	G	A	E	S	F	G	F	G	T	G	P	M
Query Conservation						.
Alig confidence						.															.	.	.
Template Conservation																					.	.	.
Template Sequence		T	A	I	R	P	I	A	L	R	A	V	T	T	I	A	R	A	L	P	.	.	.	G	F	P	I	L	A	T	G	G	I	D	S	A	E	S	G	L	Q	F	L	H	S	G	A	S	V	L	Q	V	C	S	A	V	Q
Template Known Secondary structure		G	G	G															S	T	.	.	.	T							S	S			S										T	T		S					S
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		768	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.				.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions