Job Description P77733 Confidence 17.51% Date Thu Jan 5 12:32:15 GMT 2012 Rank 19 Aligned Residues 232 % Identity 9% Template c3c02A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:aquaglyceroporin; PDBTitle: x-ray structure of the aquaglyceroporin from plasmodium falciparum Resolution 2.05 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		S	K	V	S	V	F	L	M	A	M	S	A	G	V	F	M	A	I	G	F	T	F	Y	L	S	V	I	A	D	A	P	S	S	Q	A	L	T	H	L	V	G	G	L	C	F	T	L	G	F	I	L	L	A	V	C	G	T	S	L	F	T	S	S	V	M	T	V	M	A	.	K	S	R	G	V	I	S	W	R	T
Query Conservation																																																																							.
Alig confidence																																																																							.
Template Conservation
Template Sequence		S	Y	V	R	E	F	I	G	E	F	L	G	T	F	V	L	M	F	L	G	E	G	A	T	A	N	F	H	T	T	G	L	S	G	D	W	Y	K	L	C	L	G	W	G	L	A	V	F	F	G	I	L	V	S	A	K	L	S	G	A	H	L	N	L	A	V	S	I	G	L	S	S	I	N	K	F	D	L	K	K
Template Known Secondary structure																															S	S	S	T	T																													S										T	T	S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.
Predicted Secondary structure																																																																												.	.	.
Query SS confidence																																																																												.	.	.
Query Sequence		W	L	I	N	A	L	L	V	A	C	G	N	L	A	G	I	A	C	F	S	L	L	I	W	F	S	G	L	V	M	S	E	N	A	M	W	G	V	A	V	L	H	C	A	E	G	K	M	H	H	T	F	T	E	S	V	S	L	G	I	M	C	N	L	M	V	C	L	A	L	W	M	S	Y	.	.	.	C	G	R
Query Conservation																																																																												.	.	.
Alig confidence																																			.	.	.	.	.																																					.	.	.
Template Conservation																																			.	.	.	.	.
Template Sequence		I	P	V	Y	F	F	A	Q	L	L	G	A	F	V	G	T	S	T	V	Y	G	L	Y	H	G	F	I	S	N	S	K	I	P	.	.	.	.	.	Q	F	A	W	E	T	S	R	N	P	S	I	S	L	T	G	A	F	F	N	E	L	I	L	T	G	I	L	L	L	V	I	L	V	V	V	D	E	N	I	C	G
Template Known Secondary structure																								T						T	T		S		.	.	.	.	.	T	T		S	S					T	T	S
Template Predicted Secondary structure																																			.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120						.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	C	D	K	I	V	A	M	I	L	P	I	T	L	F	V	A	S	G	F	E	H	C	I	A	N	L	F	V	I	P	F	A	I	A	I	R	H	F	A	P	P	P	F	W	Q	L	A	H	S	S	A	D	N	F	P	A	L	T	V	S	H	F	I	T	A	N	L	L	P	V	M	L	G	N	I	I	G	G
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	F	H	I	L	K	L	S	S	V	V	G	L	I	I	L	C	I	G	.	.	.	.	.	.	.	.	.	.	.	I	T	F	G	G	N	T	G	F	A	L	N	P	S	R	D	L	G	S	R	F	L	S	L	I	A	Y	G	K	D	T	F	T	K	D	N	F	Y	F	W	V	P	L	V	A	P	C	V	G	S
Template Known Secondary structure		S																			.	.	.	.	.	.	.	.	.	.	.																													T									T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.												.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		266	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	L	V	S	M	C	Y	R	A	I	Y	L
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		V	V	.	F	C	Q	F	Y	D	K	V	I	C
Template Known Secondary structure				.								T
Template Predicted Secondary structure				.
Template SS confidence
		232	.		.	.	.	.	.	.	240	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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