Job Description P77733 Confidence 71.08% Date Thu Jan 5 12:32:15 GMT 2012 Rank 10 Aligned Residues 164 % Identity 16% Template c2w2eA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:aquaporin; PDBTitle: 1.15 angstrom crystal structure of p.pastoris aquaporin,2 aqy1, in a closed conformation at ph 3.5 Resolution 1.15 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.																																		.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.																																		.	.
Query Sequence		A	R	S	K	V	S	V	F	L	M	A	M	S	A	G	V	F	M	A	I	G	F	T	F	Y	L	S	V	I	A	D	.	.	.	.	.	.	.	.	.	A	P	S	S	Q	A	L	T	H	L	V	G	G	L	C	F	T	L	G	F	I	L	L	A	V	C	G	T	S	L	F	T	S	.	.	S	V	M	T	V
Query Conservation																																	.	.	.	.	.	.	.	.	.																																		.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation
Template Sequence		G	S	D	S	V	R	N	H	F	I	A	M	S	G	E	F	V	G	T	F	L	F	L	W	S	A	F	V	I	A	Q	I	A	N	Q	A	P	E	T	P	D	G	G	S	N	P	A	Q	L	I	M	I	S	F	G	F	G	F	G	V	M	V	G	V	F	I	T	Y	R	V	S	G	G	N	L	N	P	A	V	T
Template Known Secondary structure		T	T	T	S																														T	T	S				G	G	G																										T	T	T	T					S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		97	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		M	A	.	K	S	R	G	V	I	S	W	R	T	W	L	I	N	A	L	L	V	A	C	G	N	L	A	G	I	A	C	F	S	L	L	I	W	F	S	G	L	V	M	S	E	N	A	M	W	G	V	A	V	L	H	C	A	E	G	K	M	H	H	T	F	T	E	S	V	S	L	G	I	M	C	N	L	M	V	C
Query Conservation				.
Alig confidence				.																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	L	V	L	A	R	A	I	P	P	F	R	G	I	L	M	A	F	T	Q	I	V	A	G	M	A	A	A	G	A	A	S	A	M	T	P	G	E	I	A	F	A	N	A	L	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	S	R	T	R	G	L	F	L	E	A	F	G	T	A	I	L	C
Template Known Secondary structure							T	T	S	S																											S		S	S				S					T	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.														.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	L	W	M	S	Y	C	G	R	S	L	C	D	K	I	V	A	M	I	L	P	I	T	L	F	V	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	V	L	M	L	A	V	E	K	H	R	A	T	W	F	A	P	F	V	I	G	I	A	L	L	I	A	H
Template Known Secondary structure								T	T	S		S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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