Job Description P77733 Confidence 77.68% Date Thu Jan 5 12:32:15 GMT 2012 Rank 7 Aligned Residues 172 % Identity 10% Template c2d57A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:aquaporin-4; PDBTitle: double layered 2d crystal structure of aquaporin-4 (aqp4m23) at 3.2 a2 resolution by electron crystallography Resolution 3.20 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.		.	100	.	.	.	.
Predicted Secondary structure																																																																		.	.								.
Query SS confidence																																																																		.	.								.
Query Sequence		A	R	S	K	V	S	V	F	L	M	A	M	S	A	G	V	F	M	A	I	G	F	T	F	Y	L	S	V	I	A	D	A	P	S	S	Q	A	L	T	H	L	V	G	G	L	C	F	T	L	G	F	I	L	L	A	V	C	G	T	S	L	F	T	S	.	.	S	V	M	T	V	M	A	.	K	S	R	G	V	I
Query Conservation																																																																		.	.								.
Alig confidence																																																																		.	.								.
Template Conservation
Template Sequence		T	Q	A	F	W	K	A	V	T	A	E	F	L	A	M	L	I	F	V	L	L	S	V	G	S	T	I	N	W	G	G	S	E	N	P	L	P	V	D	M	V	L	I	S	L	C	F	G	L	S	I	A	T	M	V	Q	C	F	G	H	I	S	G	G	H	I	N	P	A	V	T	V	A	M	V	C	T	R	K	I
Template Known Secondary structure			T																												S	S	S	S				T																											S			S											S		S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	R	T	W	L	I	N	A	L	L	V	A	C	G	N	L	A	G	I	A	C	F	S	L	L	I	W	F	S	G	L	V	M	S	E	N	A	M	W	G	V	A	V	L	H	C	A	E	G	K	M	H	H	T	F	T	E	S	V	S	L	G	I	M	C	N	L	M	V	C	L	A	L	W	M	S	Y	C	G
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	A	K	S	V	F	Y	I	T	A	Q	C	L	G	A	I	I	G	A	G	I	L	Y	L	V	T	P	P	S	V	V	G	G	L	G	V	T	T	V	H	G	.	.	.	.	.	.	.	.	.	.	N	L	T	A	G	H	G	L	L	V	E	L	I	I	T	F	Q	L	V	F	T	I	F	A	S	C	D	S
Template Known Secondary structure																													T	T	T	G	G	G		S	S						S	.	.	.	.	.	.	.	.	.	.																											S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.											.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		185				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		R	.	.	.	S	L	C	D	K	I	V	A	M	I	L	P	I	T	L	F	V	A	S	G	F	E	H	C
Query Conservation			.	.	.
Alig confidence			.	.	.
Template Conservation
Template Sequence		K	R	T	D	V	T	G	S	V	A	L	A	I	G	F	S	V	A	I	G	H	L	F	A	I	N	Y	T
Template Known Secondary structure		S		S				S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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