Job Description P45546 Confidence 16.29% Date Thu Jan 5 12:03:05 GMT 2012 Rank 9 Aligned Residues 192 % Identity 9% Template c3dh4A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: crystal structure of sodium/sugar symporter with bound galactose from2 vibrio parahaemolyticus Resolution 2.70 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		L	S	I	G	F	V	A	S	V	G	I	S	F	T	L	K	T	G	L	L	N	A	W	L	L	F	L	P	T	D	I	L	G	V	L	A	I	N	S	L	.	.	M	A	F	G	L	G	A	I	W	G	V	L	I	L	T	C	L	L	P	V	N	Q	L	L	T	A	L	P	V	D	V	L	G	S	L	G	E	L
Query Conservation																																										.	.
Alig confidence																																										.	.
Template Conservation
Template Sequence		K	G	V	V	F	A	A	L	A	A	A	I	V	S	S	L	A	S	M	L	N	S	T	A	T	I	F	T	M	D	I	Y	K	E	Y	I	S	P	D	S	G	D	H	K	L	V	N	V	G	R	T	A	A	V	V	A	L	I	I	A	C	L	I	A	P	M	L	G	G	I	G	Q	A	F	Q	Y	I	Q	E	Y
Template Known Secondary structure																																T							S		S		S	S																					G	G	G	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	P	V	V	S	A	F	A	L	F	P	L	V	A	I	F	Y	Q	F	G	W	K	Q	S	L	I	A	A	V	V	V	L	M	T	R	V	V	V	V	R	Y	F	P	H	L	N	P	E	S	I	E	I	F	I	G	M	V	M	L	L	G	I	A	I	T	H	D	L	R	H	R	D	E	N	D	I	D	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	L	V	S	P	G	I	L	A	V	F	L	L	G	L	F	W	K	K	T	T	S	K	G	A	I	I	G	V	V	A	S	I	P	F	A	L	F	L	K	F	M	P	L	S	M	P	F	M	D	Q	M	L	Y	T	L	L	F	T	M	V	V	I	A	F	T	S	L	S	T	S	I	N	D	D	D	P	K	G
Template Known Secondary structure			T	T	T															T	T																						T	S	S	S																									T	T		S	S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	S	V	F	E	E	R	T	S	R	I	I	K	N	L	P	Y	I	A	I	V	G	A	L	I	A	A	V	A	S	M	K	I	F
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		I	S	V	T	.	S	S	M	F	V	T	D	R	S	F	N	I	A	A	Y	G	I	M	I	V	L	A	V	L	Y	T	L	F	W	V
Template Known Secondary structure						.		S						T	T																					T
Template Predicted Secondary structure						.
Template SS confidence
		511	.	.	.		.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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