Return to main results Retrieve Phyre Job Id

Job DescriptionP16703
Confidence100.00%DateThu Jan 5 11:35:48 GMT 2012
Rank29Aligned Residues284
% Identity26%Templated1v8za1
SCOP infoTryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes
Resolution2.21

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  STLEQTIGN. TPLVKLQRMGPDN. GSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGDVLIEATSGNTGIALAMI
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Template Sequence  YYLKTWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGKT. . . RLIAETGAGQHGVATAMA
Template Known Secondary structure  TT

S


TSSGGGSTTSBTTT

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   80.........90... ......100.........110.... .....120.........130.... .....140........
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Query Sequence  AALKGYRMKLLMPD. . . NMSQERRAAMRAYGAELILVT. KEQGMEGARDLALEMANRGE. . . . . . . GKLLDQFNNPDNPY
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Template Sequence  GALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVR
Template Known Secondary structure  TT
TT
TT

STTSSTTT


SS
SSTT
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   118.120.........130.........140.........150.........160.........170.........180.........190.......
 
   149150.........160.. .......170.........180.........190.........200.
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Query Sequence  AHYTTTGPEIWQQT. . . . GGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPE. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  DFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFV. NDKKVKLVGVEAGGKGLESGKHSASLNAGQVGVFHG
Template Known Secondary structure  SS

S
SSSGGGT.T
TTSTBGGGTBS


TT
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   198.200.........210.........220.........230.........240 .........250.........260.........270......
 
   202.......210.........220.........230.........240.........250.........260......
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Query Sequence  . . . . . . . . . . . . . . . EGSSIPGIRRWPTEYLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRV
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Template Sequence  MLSYFLQDEEGQIKPTHSIAPGLDYPGVGPEHAYLKKIQRAEYVTVTDEEALKAFHELSRTEGIIPALESAHAVAYAMKL
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B
TTS
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SSTTS

SB

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   277..280.........290.........300.........310.........320.........330.........340.........350......
 
   267..270 .........280.........
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Query Sequence  AKAN. PDAVVVAIICDRGDRYLST
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Template Sequence  AKEMSRDEIIIVNLSGRGDKDLDI
Template Known Secondary structure  TS
TT

BBSGGG
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   357..360.........370.........380
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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