Job Description P16703 Confidence 100.00% Date Thu Jan 5 11:35:48 GMT 2012 Rank 27 Aligned Residues 284 % Identity 23% Template d1qopb_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 1.4

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		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		S	T	L	E	Q	T	I	G	N	.	T	P	L	V	K	L	Q	R	M	G	P	D	N	G	S	E	V	W	L	K	L	E	G	N	N	P	A	G	S	V	K	D	R	A	A	L	S	M	I	V	E	A	E	K	R	G	E	I	K	P	G	D	V	L	I	E	A	T	S	G	N	T	G	I	A	L	A	M	I	A
Query Conservation											.
Alig confidence											.																																																	.	.	.
Template Conservation																																																												.	.	.
Template Sequence		D	L	L	K	N	Y	A	G	R	P	T	A	L	T	K	C	Q	N	I	T	A	G	T	R	T	T	L	Y	L	K	R	E	D	L	L	H	G	G	A	H	K	T	N	Q	V	L	G	Q	A	L	L	A	K	R	M	G	K	S	.	.	.	E	I	I	A	E	T	G	A	G	Q	H	G	V	A	S	A	L	A	S
Template Known Secondary structure							T	T			S											T	T	S	S								G	G	G	S	T	T	S	B	T															T	T			.	.	.							S	S	S
Template Predicted Secondary structure																																																												.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.																								.																			.	.	.	.	.	.	.
Query SS confidence															.	.	.																								.																			.	.	.	.	.	.	.
Query Sequence		A	L	K	G	Y	R	M	K	L	L	M	P	D	.	.	.	N	M	S	Q	E	R	R	A	A	M	R	A	Y	G	A	E	L	I	L	V	T	K	E	.	Q	G	M	E	G	A	R	D	L	A	L	E	M	A	N	R	G	E	.	.	.	.	.	.	.	G	K	L	L	D	Q	F	N	N	P	D	N	P	Y	A
Query Conservation															.	.	.																								.																			.	.	.	.	.	.	.
Alig confidence															.	.	.																								.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	L	G	L	K	C	R	I	Y	M	G	A	K	D	V	E	R	Q	S	P	N	V	F	R	M	R	L	M	G	A	E	V	I	P	V	H	S	G	S	A	T	L	K	D	A	C	N	E	A	L	R	D	W	S	G	S	Y	E	T	A	H	Y	M	L	G	T	A	A	G	P	H	P	Y	P	T	I	V	R	E
Template Known Secondary structure					T																									T	T								S	T	T	S	S																T	T	T							S	S		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	Y	T	T	T	G	P	E	I	W	Q	Q	T	.	.	.	.	G	G	R	I	T	H	F	V	S	S	M	G	T	T	G	T	I	T	G	V	S	R	F	M	R	E	Q	S	K	P	V	T	I	V	G	L	Q	P	E	E	G	S	S	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																											.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.
Template Sequence		F	Q	R	M	I	G	E	E	T	K	A	Q	I	L	D	K	E	G	R	L	P	D	A	V	I	A	C	V	G	G	G	S	N	A	I	G	M	F	A	D	F	I	N	.	D	T	S	V	G	L	I	G	V	E	P	G	G	H	G	I	E	T	G	E	H	G	A	P	L	K	H	G	R	V	G	I	Y	F	G	M
Template Known Secondary structure		T	T	T															S	S			S							S	S	S								G	G	G	T	T	.		T	T	S										T	B	G	G	G	T	B	S							S						T
Template Predicted Secondary structure																																													.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
																						208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	R	R	W	P	T	E	Y	L	P	G	I	F	N	A	S	L	V	D	E	V	L	D	I	H	Q	R	D	A	E	N	T	M	R	E	L	A	V	R	E	G	I	F	C	G	V	S	S	G	G	A	V	A	G	A	L	R	V	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	P	M	M	Q	T	A	D	G	Q	I	E	E	S	Y	S	I	S	A	G	L	D	F	P	S	V	G	P	Q	H	A	Y	L	N	S	I	G	R	A	D	Y	V	S	I	T	D	D	E	A	L	E	A	F	K	T	L	C	R	H	E	G	I	I	P	A	L	E	S	S	H	A	L	A	H	A	L	K	M	M
Template Known Secondary structure							B		T	T	S		B						S	S	G	G	G			S	S											T	T	S	S																						S			B
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		268	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		K	A	N	.	.	P	D	A	V	V	V	A	I	I	C	D	R	G	D	R	Y	L	S	T
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		R	E	Q	P	E	K	E	Q	L	L	V	V	N	L	S	G	R	G	D	K	D	I	F	T
Template Known Secondary structure				S	T	T	S										B	B		G	G	G
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions