Job Description P16703 Confidence 100.00% Date Thu Jan 5 11:35:48 GMT 2012 Rank 25 Aligned Residues 288 % Identity 19% Template d1p5ja_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.50

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	T	I	G	N	T	P	L	V	K	L	Q	R	M	G	P	D	N	G	S	E	V	W	L	K	L	E	G	N	N	P	A	G	S	V	K	D	R	A	A	L	S	M	I	V	E	A	E	K	R	G	E	I	K	P	G	D	V	L	I	E	A	T	S	G	N	T	G	I	A	L	A	M	I	A	A	L	K	G
Query Conservation
Alig confidence																																																							.	.	.	.
Template Conservation																																																							.	.	.	.
Template Sequence		E	P	L	H	V	K	T	P	I	R	D	S	M	A	L	S	K	M	A	G	T	S	V	Y	L	K	M	D	S	A	Q	P	S	G	S	F	K	I	R	G	I	G	H	F	C	K	R	W	A	K	Q	G	C	.	.	.	.	A	H	F	V	C	S	S	A	G	N	A	G	M	A	A	A	Y	A	A	R	Q	L	G
Template Known Secondary structure				S	S																T	S							G	G	G	S	G	G	G	B	T	T														T	T		.	.	.	.								S	S														T
Template Predicted Secondary structure																																																							.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		Y	R	M	K	L	L	M	P	D	N	M	S	Q	E	R	R	A	A	M	R	A	Y	G	A	E	L	I	L	V	T	K	E	Q	G	M	E	G	A	R	D	L	A	L	E	M	A	N	R	G	.	E	G	K	L	L	D	Q	F	N	N	P	D	N	P	Y	A	H	Y	T	T	T	G	P	E	I	W	Q	Q	T	G
Query Conservation																																																			.
Alig confidence																																	.	.																	.																	.
Template Conservation																																	.	.																																		.
Template Sequence		V	P	A	T	I	V	V	P	G	T	T	P	A	L	T	I	E	R	L	K	N	E	G	A	T	C	K	V	V	G	E	.	.	L	L	D	E	A	F	E	L	A	K	A	L	A	K	N	N	P	G	W	V	Y	I	P	P	F	D	D	P	L	I	W	E	G	.	H	A	S	I	V	K	E	L	K	E	T	L	W
Template Known Secondary structure										T	T												T	T								S	.	.																S	T	T						S	S									.		T											S
Template Predicted Secondary structure																																	.	.																																		.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.																				.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																													.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	R	I	T	H	F	V	S	S	M	G	T	T	G	T	I	T	G	V	S	R	F	M	R	E	Q	S	.	K	P	V	T	I	V	G	L	Q	P	E	E	G	S	S	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	R	R	W	P	T	E	Y	L	P	G	I	F	N	A
Query Conservation																													.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	P	G	A	I	A	L	S	V	G	G	G	G	L	L	C	G	V	V	Q	G	L	Q	E	C	G	W	G	D	V	P	V	I	A	M	E	T	F	G	A	H	S	F	H	A	A	T	T	A	G	K	L	V	S	L	P	K	I	T	S	V	A	K	A	L	G	V	K	T	V	G	S	Q	A	L	K	L	F	Q
Template Known Secondary structure		S			S							S	S	S													T	T		T	T									T	T	S										T	S					S					S		G	G	G			S	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270										.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	V	D	E	V	L	D	I	H	Q	R	D	A	E	N	T	M	R	E	L	A	V	R	E	G	I	F	C	G	V	S	S	G	G	A	V	A	G	A	L	R	V	A	K	A	N	.	.	.	.	.	.	.	.	.	P	D	A	V	V	V	A	I	I	C	D	R	G	D	R	Y	L	S	T	G	V	F	G	E
Query Conservation																																																	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		E	H	P	I	F	S	E	V	I	S	D	Q	E	A	V	A	A	I	E	K	F	V	D	D	E	K	I	L	V	E	P	A	C	G	A	A	L	A	A	V	Y	S	H	V	I	Q	K	L	Q	L	E	G	N	L	R	T	P	L	P	S	L	V	V	I	V	C	G	G	S	N	I	S	L	A	Q	L	.	.	.	.
Template Known Secondary structure			S																							T																	T	T								T	T	S	S		S	S		S								B		S	S							.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		295	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	F	S	Q	G	A	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	L	K	E	Q	L	G	M
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions