Job Description P16703 Confidence 99.97% Date Thu Jan 5 11:35:48 GMT 2012 Rank 40 Aligned Residues 275 % Identity 16% Template d1kl7a_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.70

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.										60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.																									.	.	.	.	.	.	.	.	.																					.
Query SS confidence																											.																									.	.	.	.	.	.	.	.	.																					.
Query Sequence		T	P	L	V	K	L	Q	R	M	G	P	D	N	G	S	E	V	W	L	K	L	E	G	N	N	.	P	A	G	S	V	K	D	R	A	A	L	S	M	I	V	E	A	E	K	R	G	E	I	K	.	.	.	.	.	.	.	.	.	P	G	D	V	L	I	E	A	T	S	G	N	T	G	I	A	L	A	M	I	.
Query Conservation																											.																									.	.	.	.	.	.	.	.	.																					.
Alig confidence									.	.	.										.						.																									.	.	.	.	.	.	.	.	.																					.
Template Conservation									.	.	.										.
Template Sequence		T	P	L	V	Q	N	V	.	.	.	T	G	D	K	E	N	L	H	I	.	L	E	L	F	H	G	P	T	Y	A	F	K	D	V	A	L	Q	F	V	G	N	L	F	E	Y	F	L	Q	R	T	N	A	N	L	P	E	G	E	K	K	Q	I	T	V	V	G	A	T	S	G	D	T	G	S	A	A	I	Y	G	L
Template Known Secondary structure		S						T	.	.	.	T		S	S	S					.						S	T	T	S	B	T																					T	T	S		S	S	S											S	S	S
Template Predicted Secondary structure									.	.	.										.
Template SS confidence
		97	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.
Predicted Secondary structure																	.															.																																								.	.
Query SS confidence																	.															.																																								.	.
Query Sequence		A	A	L	K	G	Y	R	M	K	L	L	M	P	D	N	.	M	S	Q	E	R	R	A	A	M	R	A	Y	G	A	.	E	L	I	L	V	T	K	E	Q	G	M	E	G	A	R	D	L	A	L	E	M	A	N	R	G	E	G	K	L	L	D	Q	F	N	N	P	D	N	P	.	.	Y	A	H	Y	T	T	T	G
Query Conservation																	.															.																																								.	.
Alig confidence																	.															.																																								.	.
Template Conservation
Template Sequence		R	G	K	K	D	V	S	V	F	I	L	Y	P	T	G	R	I	S	P	I	Q	E	E	Q	X	T	T	V	P	D	E	N	V	Q	T	L	S	V	T	G	T	F	D	N	C	Q	D	I	V	K	A	I	F	G	D	K	E	F	N	H	N	V	G	A	V	N	S	I	N	W	A	R	I	L	A	Q	X	T	Y	Y
Template Known Secondary structure		T	T		T	T									T	T	S	S														T	T							S	S																S	S					B					S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		156	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.																							.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	I	W	Q	Q	T	.	.	.	.	G	G	R	I	T	H	F	V	S	S	M	G	T	T	G	T	I	T	G	V	S	R	F	M	R	E	Q	S	K	P	V	T	I	V	G	L	Q	P	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	S	I	P	G	I
Query Conservation									.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	Y	S	F	F	Q	A	T	N	G	K	D	S	K	K	V	K	F	V	V	P	S	G	N	F	G	D	I	L	A	G	Y	F	A	K	K	X	G	L	P	I	E	K	L	A	I	A	T	N	E	N	D	I	L	D	R	F	L	K	S	G	L	Y	E	R	S	D	K	V	A	A	T	L	S	P	A	X	D	I	L
Template Known Secondary structure										S	S	S	S											S	S	S													T												S											S						S	S					S		G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.																																							.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Query Sequence		R	R	W	P	T	E	Y	L	P	G	I	F	N	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	D	E	V	L	D	I	H	Q	R	D	A	E	N	T	M	R	E	L	A	V	R	E	.	.	.
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation
Template Sequence		I	S	S	N	F	E	R	L	L	W	Y	L	A	R	E	Y	L	A	N	G	D	D	L	K	A	G	E	I	V	N	N	W	F	Q	E	L	K	T	N	G	K	F	Q	V	D	K	S	I	I	E	G	A	S	K	D	F	T	S	E	R	V	S	N	E	E	T	S	E	T	I	K	K	I	Y	E	S	S	V	N	P
Template Known Secondary structure		S		T	T													T	S	T	T																				S													T	T	T																								S	S
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
			249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																							.	.
Query SS confidence		.																							.	.
Query Sequence		.	G	I	F	C	G	V	S	S	G	G	A	V	A	G	A	L	R	V	A	K	A	N	.	.	P	D	A	V	V	V	A	I	I	C	D	R	G	D	R	Y	L	S	T
Query Conservation		.																							.	.
Alig confidence		.																							.	.
Template Conservation
Template Sequence		K	H	Y	I	L	D	P	H	T	A	V	G	V	C	A	T	E	R	L	I	A	K	D	N	D	K	S	I	Q	Y	I	S	L	S	T	A	H	P	A	K	F	A	D	A
Template Known Secondary structure		T	T																								T	T	S								B		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions