Job Description P16703 Confidence 37.78% Date Thu Jan 5 11:35:48 GMT 2012 Rank 164 Aligned Residues 175 % Identity 12% Template c3ktdC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of a putative prephenate dehydrogenase (cgl0226)2 from corynebacterium glutamicum atcc 13032 at 2.60 a resolution Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	V	L	I	E	A	T	S	G	N	T	G	I	A	L	A	M	I	A	A	L	K	G	Y	R	M	K	L	L	M	P	D	N	M	S	Q	E	R	R	A	A	M	R	A	Y	G	A	E	L	I	L	V	T	K	E	Q	G	M	E	G	A	R	D	L	A	L	E	M	A	N	R	G	E	G	K	L	L	D	Q
Query Conservation
Alig confidence																																			.	.	.																	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.																	.	.	.	.	.	.	.	.
Template Sequence		S	R	P	V	C	I	L	G	L	G	L	I	G	G	S	L	L	R	D	L	H	A	A	N	H	S	V	F	G	Y	N	R	S	.	.	.	R	S	G	A	K	S	A	V	D	E	G	F	D	V	S	A	.	.	.	.	.	.	.	.	D	L	E	A	T	L	Q	R	A	A	A	E	D	A	L	I	V	L	A	V
Template Known Secondary structure		S	S								S													T	T								S	S	.	.	.										T	T					S	.	.	.	.	.	.	.	.												T	T							S
Template Predicted Secondary structure																																			.	.	.																	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.									.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		F	N	N	P	D	N	P	Y	A	H	Y	T	T	T	G	P	E	I	W	Q	Q	T	G	G	R	I	T	H	F	V	S	S	M	G	T	T	G	T	I	T	G	V	S	R	F	M	R	E	Q	S	K	P	V	T	I	V	G	L	Q	P	E	E	G	S	S	I	P	G	I	R	R	W	P	T	E	Y	L	P	G	.
Query Conservation																																																																																	.
Alig confidence			.	.	.	.	.	.														.		.	.											.	.																														.														.
Template Conservation			.	.	.	.	.	.														.		.	.											.	.																														.
Template Sequence		P	.	.	.	.	.	.	X	T	A	I	D	S	L	L	D	A	V	H	T	.	H	.	.	A	P	N	N	G	F	T	D	V	V	.	.	S	V	K	T	A	V	Y	D	A	V	K	A	R	N	X	Q	H	R	Y	V	G	S	H	P	X	A	G	T	A	.	N	G	W	S	A	S	X	D	G	L	F	K	R	A
Template Known Secondary structure			.	.	.	.	.	.														.		.	.		T	T								.	.	S		S										T	T		G	G	G	B						T	T				.			G	G	G			S	S	S	S	T	T
Template Predicted Secondary structure			.	.	.	.	.	.														.		.	.											.	.																														.
Template SS confidence
		76							.	.	.	80	.	.	.	.	.	.	.	.	.		90			.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.
						220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	I	F	N	A	S	L	V	D	E	V	L	D	I	H	Q	R	D	A	E	N	T	M	R	E	L	A	V	R	E	G	I	F	C	G	V	S	S	G	G
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		V	W	V	V	T	F	D	Q	L	F	D	G	T	D	I	N	S	T	W	I	S	I	W	K	D	V	V	Q	X	A	L	A	V	G	A	E	V	V	P	S	R	V	G
Template Known Secondary structure								G	G	G	T	S	S																					T	T
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions