Job Description P16703 Confidence 100.00% Date Thu Jan 5 11:35:48 GMT 2012 Rank 21 Aligned Residues 290 % Identity 22% Template c3iauA_ PDB info PDB header:lyase Chain: A: PDB Molecule:threonine deaminase; PDBTitle: the structure of the processed form of threonine deaminase isoform 22 from solanum lycopersicum Resolution 2.35 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	L	E	Q	T	I	G	N	T	P	L	V	K	L	Q	R	M	G	P	D	N	G	S	E	V	W	L	K	L	E	G	N	N	P	A	G	S	V	K	D	R	A	A	L	S	M	I	V	E	A	E	K	R	G	E	I	K	P	G	D	V	L	I	E	A	T	S	G	N	T	G	I	A	L	A	M	I	A	A
Query Conservation
Alig confidence																																										.														.	.	.
Template Conservation																																										.														.	.	.
Template Sequence		S	P	V	Y	D	V	A	I	E	S	P	L	E	L	A	E	K	L	S	D	R	L	G	V	N	F	Y	I	K	R	E	D	K	Q	R	V	F	S	F	L	.	R	G	A	Y	N	M	M	S	N	L	S	R	E	.	.	.	E	L	D	K	G	V	I	T	A	S	A	G	N	H	A	Q	G	V	A	L	A	G	Q
Template Known Secondary structure				G	G	G	T																	T	S							G	G	G	S	T	T	S	B			.									T	S				.	.	.											S	S
Template Predicted Secondary structure																																										.														.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	G	Y	R	M	K	L	L	M	P	D	N	M	S	Q	E	R	R	A	A	M	R	A	Y	G	A	E	L	I	L	V	T	K	E	Q	G	M	E	G	A	R	D	L	A	L	E	M	A	N	R	G	E	G	K	L	L	D	Q	F	N	N	P	D	N	P	Y	A	H	Y	T	T	T	G	P	E	I	W	Q	Q
Query Conservation
Alig confidence																																					.	.																																.
Template Conservation																																					.	.																																.
Template Sequence		R	L	N	C	V	A	K	I	V	M	P	T	T	T	P	Q	I	K	I	D	A	V	R	A	L	G	G	D	V	V	L	Y	G	K	T	.	.	F	D	E	A	Q	T	H	A	L	E	L	S	E	K	D	G	L	K	Y	I	P	P	F	D	D	P	G	V	I	K	G	.	Q	G	T	I	G	T	E	I	N	R	Q
Template Known Secondary structure			T	T									T	T												T	T								S	S	.	.																T						S	S	S	S							.
Template Predicted Secondary structure																																					.	.																																.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	G	R	I	T	H	F	V	S	S	M	G	T	T	G	T	I	T	G	V	S	R	F	M	R	E	Q	S	K	P	V	T	I	V	G	L	Q	P	E	E	G	S	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	I	R	R	W	P	T	E	Y	L	P	G	I	F	N
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.
Template Sequence		L	K	D	.	I	H	A	V	F	I	P	V	G	G	G	G	L	I	A	G	V	A	T	F	F	K	Q	I	A	P	N	T	K	I	I	G	V	E	P	Y	G	A	A	S	M	T	L	S	L	H	E	G	H	R	V	K	L	S	N	V	D	T	F	A	D	G	V	A	V	A	L	V	G	E	Y	T	F	A	K	C
Template Known Secondary structure				S	.									S	S	S														S	T	T	S								G	G	G										T	S					S					S	S	G	G	G			S	S
Template Predicted Secondary structure					.
Template SS confidence
		206	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		A	S	L	V	D	E	V	L	D	I	H	Q	R	D	A	E	N	T	M	R	E	L	A	V	R	E	G	I	F	C	G	V	S	S	G	G	A	V	A	G	A	L	R	V	A	K	A	N	.	.	P	D	A	V	V	V	A	I	I	C	D	R	G	D	R	Y	L	S	T	G	V	F	G	E	E	H	F	S	Q	G
Query Conservation																																																		.	.
Alig confidence																																																		.	.												.								.	.
Template Conservation																																																															.								.	.
Template Sequence		Q	E	L	I	D	G	M	V	L	V	A	N	D	G	I	S	A	A	I	K	D	V	Y	D	E	G	R	N	I	L	E	T	S	G	A	V	A	I	A	G	A	A	A	Y	C	E	F	Y	K	I	K	N	E	N	I	V	A	I	A	S	G	.	A	N	M	D	F	S	K	.	.	L	H	K	V	T	E	L	A	G
Template Known Secondary structure																												S																					T	T			S									B	.					G	G	G	.	.									T
Template Predicted Secondary structure																																																															.								.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.			.	.	.	.	.	.	.	360	.
		301	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		362	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions