Job Description P16703 Confidence 38.06% Date Thu Jan 5 11:35:48 GMT 2012 Rank 162 Aligned Residues 183 % Identity 13% Template c3b1fA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 mutans Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	D	V	L	I	E	A	T	S	G	N	T	G	I	A	L	A	M	I	A	A	L	K	G	Y	R	M	K	L	L	M	P	D	N	M	S	Q	E	R	R	A	A	M	R	A	Y	G	A	E	L	I	L	V	T	K	E	Q	G	M	E	G	A	R	D	L	A	L	E	M	A	N	R	G	E	G	K	L	L	D
Query Conservation
Alig confidence																																		.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.																									.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	K	T	I	Y	I	A	G	L	G	L	I	G	A	S	L	A	L	G	I	K	R	D	H	P	H	Y	K	I	V	G	.	Y	N	R	S	D	R	S	R	D	I	A	L	E	R	G	I	V	D	E	A	T	A	D	F	.	.	.	.	.	.	.	.	.	.	K	V	F	A	A	L	A	D	V	I	I	L	A
Template Known Secondary structure												S															T	T	S					.			S	S										T	T	S		S				S		T	.	.	.	.	.	.	.	.	.	.	T	T	T	G	G	G		S
Template Predicted Secondary structure																																		.																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.											.	.	60	.	.	.	.	.	.	.	.	.	70
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	N	N	P	D	N	P	Y	A	H	Y	T	T	T	G	P	E	I	W	Q	Q	T	G	G	R	I	T	H	F	V	S	S	M	G	T	T	G	T	I	T	G	V	S	R	F	M	R	E	Q	S	K	P	V	T	I	V	G	L	Q	P	E	E	G	S	S	I	P	G	I	R	R	W	P	T	E	Y	L	P	G
Query Conservation
Alig confidence				.	.	.	.	.	.																		.
Template Conservation				.	.	.	.	.	.																		.
Template Sequence		V	P	.	.	.	.	.	.	I	K	K	T	I	D	F	I	K	I	L	A	D	L	D	L	K	.	E	D	V	I	I	T	D	A	G	S	T	K	Y	E	I	V	R	A	A	E	Y	Y	L	K	D	K	P	V	Q	F	V	G	S	H	P	X	A	S	G	A	V	A	A	N	V	N	L	F	E	N	A	Y	Y	I
Template Known Secondary structure		S		.	.	.	.	.	.													T	S				.	T	T								S														T	T	S	S										.			T	T	S			T	T	T	T	T	T	S
Template Predicted Secondary structure				.	.	.	.	.	.																		.
Template SS confidence
		71	.							.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	N	A	S	L	V	D	E	V	L	D	I	H	Q	R	D	A	E	N	T	M	R	E	L	A	V	R	E	G	I	F	C	G	V	S	S	G	G	A	V	A	G	A	L	R	V	A
Query Conservation
Alig confidence											.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.
Template Sequence		F	S	P	S	C	L	T	K	P	.	.	.	.	.	.	.	N	T	I	P	A	L	Q	D	L	L	S	G	L	H	A	R	Y	V	E	I	D	A	A	E	H	D	C	V	T	S	Q	I
Template Known Secondary structure						T	T			T	.	.	.	.	.	.	.	T									T	G	G	G
Template Predicted Secondary structure											.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.								.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions