Job Description P16703 Confidence 100.00% Date Thu Jan 5 11:35:48 GMT 2012 Rank 33 Aligned Residues 264 % Identity 27% Template c2o2jA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase beta chain; PDBTitle: mycobacterium tuberculosis tryptophan synthase beta chain2 dimer (apoform) Resolution 2.56 Å

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		4	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure									.															.
Query SS confidence									.															.
Query Sequence		L	E	Q	T	I	G	N	.	T	P	L	V	K	L	Q	R	M	G	P	D	N	G	.	S	E	V	W	L	K	L	E	G	N	N	P	A	G	S	V	K	D	R	A	A	L	S	M	I	V	E	A	E	K	R	G	E	I	K	P	G	D	V	L	I	E	A	T	S	G	N	T	G	I	A	L	A	M	I	A	A
Query Conservation									.															.
Alig confidence									.															.																																			.	.	.
Template Conservation																																																											.	.	.
Template Sequence		Q	A	N	Y	A	G	R	P	S	P	L	Y	E	A	T	R	L	S	Q	H	A	G	S	A	R	I	F	L	K	R	E	D	L	N	H	T	G	S	H	K	I	N	N	V	L	G	Q	A	L	L	A	R	R	M	G	K	T	.	.	.	R	V	I	A	E	T	G	A	G	Q	H	G	V	A	T	A	T	A	C	A
Template Known Secondary structure			T	T	T	S	S		S							T	T	T	G	G	G	T	T	T								G	G	G			T	T																	T	T			.	.	.							S	S	S
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.								.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure														.	.	.																								.																				.	.	.	.	.	.	.
Query SS confidence														.	.	.																								.																				.	.	.	.	.	.	.
Query Sequence		L	K	G	Y	R	M	K	L	L	M	P	D	.	.	.	N	M	S	Q	E	R	R	A	A	M	R	A	Y	G	A	E	L	I	L	V	T	K	E	.	Q	G	M	E	G	A	R	D	L	A	L	E	M	A	N	R	G	E	G	.	.	.	.	.	.	.	K	L	L	D	Q	F	N	N	P	D	N	P	Y	A	H
Query Conservation														.	.	.																								.																				.	.	.	.	.	.	.
Alig confidence														.	.	.																								.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	G	L	D	C	V	I	Y	M	G	G	I	D	T	A	R	Q	A	L	N	V	A	R	M	R	L	L	G	A	E	V	V	A	V	Q	T	G	S	K	T	L	K	D	A	I	N	E	A	F	R	D	W	V	A	N	A	D	N	T	Y	Y	C	F	G	T	A	A	G	P	H	P	F	P	T	M	V	R	D	F
Template Known Secondary structure				T														S	S	T	T								T	T								S	S	S		S																T	T	T								S	S	S											G
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		Y	T	T	T	G	P	E	I	W	Q	Q	T	.	.	.	.	G	G	R	I	T	H	F	V	S	S	M	G	T	T	G	T	I	T	G	V	S	R	F	M	R	E	Q	S	K	P	V	T	I	V	G	L	Q	P	E	E	G	S	S	I	P	G	I	R	R	W	P	T	E	Y	L	P	G	I	F	N	A	S	L	V
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.																											.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	I	I	G	M	E	A	R	V	Q	I	Q	G	Q	A	G	R	L	P	D	A	V	V	A	C	V	G	G	G	S	N	A	I	G	I	F	H	A	F	L	D	.	D	P	G	V	R	L	V	G	F	E	A	A	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G															S	S			S							S	S		T	T	S	G	G	G	S	G	G	G	T	T	.		T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		D	E	V	L	D	I	H	Q	R	D	A	E	N	T	M	R	E	L	A	V	R	E	G	I	F	C	G	V	S	S	G	G	A	V	A	G	A	L	R	V	A	K	A	.	N	P	D	A	V	V	V	A	I	I	C	D	R	G	D	R	Y	L	S	T	G	V	F	G	E	E	H	F
Query Conservation																																													.
Alig confidence																																													.																					.			.	.
Template Conservation																																																																		.			.	.
Template Sequence		V	D	Y	R	P	I	T	D	S	E	A	M	D	A	F	G	L	L	C	R	M	E	G	I	I	P	A	I	E	S	A	H	A	V	A	G	A	L	K	L	G	V	E	L	G	R	G	A	V	I	V	V	N	L	S	G	R	G	D	K	D	V	E	T	.	A	A	.	.	K	W	F
Template Known Secondary structure																							S																								T	T									S		S	S	S					.			.	.
Template Predicted Secondary structure																																																																		.			.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.		400	.			.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions