Job Description P16703 Confidence 100.00% Date Thu Jan 5 11:35:48 GMT 2012 Rank 22 Aligned Residues 278 % Identity 20% Template c2gn0A_ PDB info PDB header:lyase Chain: A: PDB Molecule:threonine dehydratase catabolic; PDBTitle: crystal structure of dimeric biodegradative threonine deaminase (tdcb)2 from salmonella typhimurium at 1.7 a resolution (triclinic form with3 one complete subunit built in alternate conformation) Resolution 1.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	E	Q	T	I	G	N	T	P	L	V	K	L	Q	R	M	G	P	D	N	G	S	E	V	W	L	K	L	E	G	N	N	P	A	G	S	V	K	D	R	A	A	L	S	M	I	V	E	A	E	K	R	G	E	I	K	P	G	D	V	L	I	E	A	T	S	G	N	T	G	I	A	L	A	M	I	A	A	L
Query Conservation
Alig confidence																																																									.	.	.	.
Template Conservation																																																									.	.	.	.
Template Sequence		R	L	A	G	K	I	Y	K	T	G	M	P	R	S	N	Y	F	S	E	R	C	K	G	E	I	F	L	K	F	E	N	M	Q	R	T	G	S	F	I	R	G	A	F	N	K	L	S	S	L	T	E	A	E	K	R	.	.	.	.	K	G	V	V	A	C	S	A	G	N	H	A	Q	G	V	S	L	S	C	A	M
Template Known Secondary structure				T	T	T	S							B									T	S							G	G	G	S	G	G	G	B												S							.	.	.	.	T							S	S
Template Predicted Secondary structure																																																									.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	Y	R	M	K	L	L	M	P	D	N	M	S	Q	E	R	R	A	A	M	R	A	Y	G	A	E	L	I	L	V	T	K	E	Q	G	M	E	G	A	R	D	L	A	L	E	M	A	N	R	G	E	G	K	L	L	D	Q	F	N	N	P	D	N	P	Y	A	H	Y	T	T	T	G	P	E	I	W	Q	Q	T
Query Conservation
Alig confidence																																				.	.																																.
Template Conservation																																				.	.																																.
Template Sequence		L	G	I	D	G	K	V	V	M	P	K	G	A	P	K	S	K	V	A	A	T	C	D	Y	S	A	E	V	V	L	H	G	D	N	.	.	F	N	D	T	I	A	K	V	S	E	I	V	E	T	E	G	R	I	F	I	P	P	Y	D	D	P	K	V	I	A	G	.	Q	G	T	I	G	L	E	I	M	E	D	L
Template Known Secondary structure			T									T	T	S												S								S	S	.	.																						S	S	S	S							.
Template Predicted Secondary structure																																				.	.																																.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.																				.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	R	I	T	H	F	V	S	S	M	G	T	T	G	T	I	T	G	V	S	R	F	M	R	E	Q	S	K	P	V	T	I	V	G	L	Q	P	E	E	G	S	S	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	R	R	W	P	T	E	Y	L	P	G	I	F	N	A
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.
Template Sequence		Y	D	.	V	D	N	V	I	V	P	I	G	G	G	G	L	I	A	G	I	A	I	A	I	K	S	I	N	P	T	I	K	V	I	G	V	Q	A	E	N	V	H	G	M	A	A	S	Y	Y	T	G	E	I	T	T	H	R	T	T	G	T	L	A	D	G	C	D	V	S	R	P	G	N	L	T	Y	E	I	V	R
Template Known Secondary structure		T	T	.									S	S	S															T	T	S								T	T	B										T	S						S	S			S		G	G	G			S	S
Template Predicted Secondary structure				.
Template SS confidence
		174	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		S	L	V	D	E	V	L	D	I	H	Q	R	D	A	E	N	T	M	R	E	L	A	V	R	E	G	I	F	C	G	V	S	S	G	G	A	V	A	G	A	L	R	V	A	K	A	N	.	.	P	D	A	V	V	V	A	I	I	C	D	R	G	D	R	Y	L	S	T
Query Conservation																																																	.	.
Alig confidence																																																	.	.												.
Template Conservation																																																														.
Template Sequence		E	L	V	D	D	I	V	L	V	S	E	D	E	I	R	N	S	M	I	A	L	I	Q	R	N	K	V	I	T	E	G	A	G	A	L	A	C	A	A	L	L	S	G	K	L	D	S	H	I	Q	N	R	K	T	V	S	I	I	S	G	.	G	N	I	D	L	S	R
Template Known Secondary structure																																T	G	G	G									T	T	T					T	T	S								B	.
Template Predicted Secondary structure																																																														.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions