|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |
| . | . |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | T | L | E | Q | T | I | G | N | T | P | L | V | K | L | Q | R | M | G | P | D | N | G | . |
. |
S | E | V | W | L | K | L | E | G | N | N | P | A | G | S | V | K | D | R | A | A | L | S | M | I | V | E | A | E | K | R | G | E | I | K | P | G | D | V | L | I | E | A | T | S | G | N | T | G | I | A | L | A | M |
Query Conservation |   |
  |   |   |
|   |   |   |
|
|   |
|
|
|   |   |   |   |   |
|   |   |   |   |
| . | . |   |   |
|   |   |
|   |
|   |   |
|
|
|
|
|   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|
|   |
|   |
|   |   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |
|   |
|   |
|   |
Template Sequence |   |
L | P | D | I | L | K | K | I | G | D | T | P | M | V | R | I | N | K | I | G | K | K | F | G | L | K | C | E | L | L | A | K | C | E | F | F | N | A | G | G | S | V | K | D | R | I | S | L | R | M | I | E | D | A | E | R | D | G | T | L | K | P | G | D | T | I | I | E | P | T | S | G | N | T | G | I | G | L | A | L |
Template Known Secondary structure |   |
| S | S | G | G | G | G | S | S |
|
|
|  |  |  |
|
| S |  |  |  |  | T | T |
|
| S |  |  |  |  |  |  | G | G | G | S | T | T | S | B | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
| T | T |
|  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
  |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | A | L | K | G | Y | R | M | K | L | L | M | P | D | N | M | S | Q | E | R | R | A | A | M | R | A | Y | G | A | E | L | I | L | V | T | K | E | Q | G | M | E | G | A | R | D | L | A | L | E | M | A | N | R | G | E | G | K | L | L | D | Q | F | N | N | P | D | N | P | Y | A | H | Y | T | T | T | G | P | E | I |
Query Conservation |   |
  |
|   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|
|   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
Template Sequence |   |
A | A | A | V | R | G | Y | R | C | I | I | V | M | P | E | K | M | S | S | E | K | V | D | V | L | R | A | L | G | A | E | I | V | R | T | P | T | E | S | H | V | G | V | A | W | R | L | K | N | E | . |
. |
. |
I | P | N | S | H | I | L | D | Q | Y | R | N | A | S | N | P | L | A | H | Y | D | T | T | A | D | E | I |
Template Known Secondary structure |   |
 |  |  |  |  | T |
|  |  |  |  |  |  |
| S |
|
|
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | S | T | T |  |  |
|
|
| T | T | T |
| T |  |  |  |  |  |  |  |  | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | |
|
|
. | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
  |
  |   |
159 | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | Q | Q | T | G | G | R | I | T | H | F | V | S | S | M | G | T | T | G | T | I | T | G | V | S | R | F | M | R | E | Q | S | K | P | V | T | I | V | G | L | Q | P | E | E | G | S | S | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | G | I | R | R | W | P | T | E | Y | L | P | G | I | F | N | A | S | L | V |
Query Conservation |   |
  |   |
|
|   |   |   |   |
|   |
|
|   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |   |
|
|   |
|
|   |   |
|
|   |
|
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | Q | Q | C | D | G | K | L | D | M | L | V | A | S | V | G | T | G | G | T | I | T | G | I | A | R | K | L | K | E | K | C | P | G | C | R | I | I | G | V | D | P | E | G | S | I | L | A | E | P | E | E | L | N | Q | T | E | Q | T | T | Y | E | V | E | G | I | G | Y | D | F | I | P | T | V | L | D | R | T | V | V |
Template Known Secondary structure |   |
 |  |  |  | T | T |
|
|
|  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  | T | T |
| S |
| S | S | S | G | G | G | G |
|
| S |
|
|
|
| S |
|
| S |
|
|
| S | S |
|
| T | T |
|
| G | G | G |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 |
  |
  |   |
227 | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | |
. | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 |
Predicted Secondary structure |   |
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | E | V | L | D | I | H | Q | R | D | A | E | N | T | M | R | E | L | A | V | R | E | G | I | F | C | G | V | S | S | G | G | A | V | A | G | A | L | R | V | A | K | A | N | . |
P | D | A | V | V | V | A | I | I | C | D | R | G | D | R | Y | L | S | T | G | V | F | G | E | E | H | F | S | Q | G |
Query Conservation |   |
|   |   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   | . |   |   |   |   |
|
|   |
|   |   |
|   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|   |
|   |
|
|   |   |   | . |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
D | K | W | F | K | S | N | D | E | E | A | F | T | F | A | R | M | L | I | A | Q | E | G | L | L | C | G | G | S | A | G | S | T | V | A | V | A | V | K | A | A | Q | E | L | Q | E | G | Q | R | C | V | V | I | L | P | D | S | V | R | N | Y | M | T | K | . |
F | L | S | D | R | W | M | L | Q | K |
Template Known Secondary structure |   |
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|
| T | T |
|  |  |  |  |  |  |
| B | B | G | G | G | G | T | T | T | . | T | T |
|  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  | . |
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
321 | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | |
. | . | . | . | . | 390 | . | . | . | . |
  |