Job Description P0CE53 Confidence 15.28% Date Thu Jan 5 11:30:21 GMT 2012 Rank 20 Aligned Residues 129 % Identity 10% Template c3eplA_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:trna isopentenyltransferase; PDBTitle: crystallographic snapshots of eukaryotic2 dimethylallyltransferase acting on trna: insight into trna3 recognition and reaction mechanism Resolution 3.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	G	F	I	M	S	H	Q	L	T	F	A	D	S	E	F	S	S	K	R	R	Q	T	R	K	E	I	F	L	S	R	M	E	Q	I	L	P	W	Q	N	M	V	E	V	I	E	P	F	Y	P	K	A	G	N	G	R	R	P	Y	P	L	E	T	M	L	R	I	H	C	M	Q	H	W	Y	N	L	S	D	G
Query Conservation
Alig confidence										.																			.	.
Template Conservation										.																			.	.
Template Sequence		G	T	H	Y	Y	L	Q	T	.	L	F	N	K	R	V	D	T	K	S	S	E	R	K	L	T	R	K	.	.	Q	L	D	I	L	E	S	T	D	P	D	V	I	Y	N	T	L	V	K	C	D	P	D	I	A	T	K	Y	H	P	N	D	Y	R	R	V	Q	R	M	L	E	I	Y	Y	K	T	G	K	K	P	S
Template Known Secondary structure		S		T	T	G	G	G	G	.	G	B	S		S			T	T	T									.	.						T		S												S							T	S		T	T																S	S
Template Predicted Secondary structure										.																			.	.
Template SS confidence
		111	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	E	D	A	L	Y	E	I	A	S	M	R	L	F	A	R	L	S	L	D	S	A	L	P	D	R	T	T	I	M	N	F	R	H	L	L	E	Q	H	Q	L	A	R	Q	L	F	K	T	I	N	R	W	L	A	E
Query Conservation
Alig confidence															.								.	.	.
Template Conservation															.								.	.	.
Template Sequence		E	T	F	N	E	Q	K	I	T	L	K	F	D	.	T	L	F	L	W	L	Y	.	.	.	S	K	P	E	P	L	F	Q	R	L	D	D	R	V	D	D	M	L	E	R	G	A	L	Q	E	I	K	Q	L	Y	E	Y
Template Known Secondary structure						T					B	S	S		.								.	.	.																				T	T
Template Predicted Secondary structure															.								.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.				.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions